Hb_000950_080

Information

Type -
Description -
Location Contig950: 131832-137023
Sequence    

Annotation

kegg
ID cit:102611758
description uncharacterized LOC102611758
nr
ID XP_006494714.1
description PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]
swissprot
ID -
description -
trembl
ID B9SR74
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1182910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000950_080 0.0 - - PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]
2 Hb_000015_010 0.1070803866 - - -
3 Hb_009615_110 0.1179177763 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
4 Hb_004374_010 0.1270753387 - - PREDICTED: PIN2/TERF1-interacting telomerase inhibitor 1 [Jatropha curcas]
5 Hb_005271_070 0.1284134698 - - PREDICTED: RNA-binding protein NOB1 [Jatropha curcas]
6 Hb_000284_200 0.132554144 - - -
7 Hb_164010_020 0.1363026557 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Jatropha curcas]
8 Hb_000318_140 0.1369480679 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
9 Hb_006173_020 0.1418842448 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
10 Hb_000035_400 0.1421850489 - - PREDICTED: lariat debranching enzyme-like [Citrus sinensis]
11 Hb_005741_020 0.1422297974 - - PREDICTED: putative golgin subfamily A member 6-like protein 6 [Jatropha curcas]
12 Hb_025048_030 0.1423026174 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
13 Hb_000320_440 0.1436414486 - - PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 [Jatropha curcas]
14 Hb_001009_050 0.1459817028 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
15 Hb_001623_550 0.1462622376 - - PREDICTED: surfeit locus protein 6 [Jatropha curcas]
16 Hb_010298_020 0.1464336375 - - PREDICTED: uncharacterized protein At2g02148 isoform X4 [Vitis vinifera]
17 Hb_000264_060 0.1475947129 - - PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas]
18 Hb_025557_020 0.1492464462 - - PREDICTED: activating signal cointegrator 1 [Jatropha curcas]
19 Hb_004232_010 0.1498125535 - - PREDICTED: uncharacterized protein LOC105650678 [Jatropha curcas]
20 Hb_017098_030 0.150200668 - - hypothetical protein POPTR_0001s03560g [Populus trichocarpa]

Gene co-expression network

sample Hb_000950_080 Hb_000950_080 Hb_000015_010 Hb_000015_010 Hb_000950_080--Hb_000015_010 Hb_009615_110 Hb_009615_110 Hb_000950_080--Hb_009615_110 Hb_004374_010 Hb_004374_010 Hb_000950_080--Hb_004374_010 Hb_005271_070 Hb_005271_070 Hb_000950_080--Hb_005271_070 Hb_000284_200 Hb_000284_200 Hb_000950_080--Hb_000284_200 Hb_164010_020 Hb_164010_020 Hb_000950_080--Hb_164010_020 Hb_000015_010--Hb_004374_010 Hb_000015_010--Hb_000284_200 Hb_002044_090 Hb_002044_090 Hb_000015_010--Hb_002044_090 Hb_000188_190 Hb_000188_190 Hb_000015_010--Hb_000188_190 Hb_000062_230 Hb_000062_230 Hb_000015_010--Hb_000062_230 Hb_160818_010 Hb_160818_010 Hb_000015_010--Hb_160818_010 Hb_000318_140 Hb_000318_140 Hb_009615_110--Hb_000318_140 Hb_000320_440 Hb_000320_440 Hb_009615_110--Hb_000320_440 Hb_002955_010 Hb_002955_010 Hb_009615_110--Hb_002955_010 Hb_001009_050 Hb_001009_050 Hb_009615_110--Hb_001009_050 Hb_000270_450 Hb_000270_450 Hb_009615_110--Hb_000270_450 Hb_006173_020 Hb_006173_020 Hb_009615_110--Hb_006173_020 Hb_001956_120 Hb_001956_120 Hb_004374_010--Hb_001956_120 Hb_004374_010--Hb_000062_230 Hb_017098_030 Hb_017098_030 Hb_004374_010--Hb_017098_030 Hb_004374_010--Hb_002044_090 Hb_011537_040 Hb_011537_040 Hb_004374_010--Hb_011537_040 Hb_005271_070--Hb_011537_040 Hb_000258_410 Hb_000258_410 Hb_005271_070--Hb_000258_410 Hb_005271_070--Hb_164010_020 Hb_005741_020 Hb_005741_020 Hb_005271_070--Hb_005741_020 Hb_000500_290 Hb_000500_290 Hb_005271_070--Hb_000500_290 Hb_005271_070--Hb_004374_010 Hb_002681_140 Hb_002681_140 Hb_000284_200--Hb_002681_140 Hb_000847_070 Hb_000847_070 Hb_000284_200--Hb_000847_070 Hb_004502_030 Hb_004502_030 Hb_000284_200--Hb_004502_030 Hb_006637_060 Hb_006637_060 Hb_000284_200--Hb_006637_060 Hb_001514_200 Hb_001514_200 Hb_000284_200--Hb_001514_200 Hb_025557_020 Hb_025557_020 Hb_164010_020--Hb_025557_020 Hb_164010_020--Hb_000318_140 Hb_164010_020--Hb_009615_110 Hb_009913_050 Hb_009913_050 Hb_164010_020--Hb_009913_050 Hb_164010_020--Hb_000258_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.194181 0.0572937 0.0245659 0 0.167918 0.228475
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.123156 0.0775201 0.0366692 0.0308652 0.0408579

CAGE analysis