Hb_000462_010

Information

Type -
Description -
Location Contig462: 9160-13651
Sequence    

Annotation

kegg
ID egr:104438941
description UDP-glycosyltransferase 73C3-like
nr
ID CAN83017.1
description hypothetical protein VITISV_041696 [Vitis vinifera]
swissprot
ID Q9AT54
description Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=1
trembl
ID A5BA41
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041696 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 73c3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000462_010 0.0 - - hypothetical protein VITISV_041696 [Vitis vinifera]
2 Hb_005678_020 0.0361977852 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_005010_030 0.0586992182 - - PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Jatropha curcas]
4 Hb_009315_010 0.0600022897 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
5 Hb_005843_010 0.0621496523 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
6 Hb_001711_140 0.0732099327 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]
7 Hb_036790_110 0.081375352 - - hypothetical protein JCGZ_22271 [Jatropha curcas]
8 Hb_000749_300 0.0818452057 - - PREDICTED: uncharacterized protein LOC105129180 [Populus euphratica]
9 Hb_002477_190 0.0915960163 - - hypothetical protein EUGRSUZ_C03380, partial [Eucalyptus grandis]
10 Hb_185726_010 0.0935310103 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
11 Hb_001902_040 0.09737679 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000708_020 0.0989125098 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_000083_210 0.1017362227 - - Major facilitator superfamily protein, putative [Theobroma cacao]
14 Hb_000958_090 0.1054079335 - - PREDICTED: cation/H(+) antiporter 28 [Jatropha curcas]
15 Hb_001433_090 0.105419549 - - Pectinesterase PPE8B precursor, putative [Ricinus communis]
16 Hb_026549_060 0.1064585492 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
17 Hb_005288_100 0.1067478884 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
18 Hb_006615_090 0.1084585817 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
19 Hb_001500_130 0.110044112 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
20 Hb_003008_020 0.1102693699 - - auxin-responsive family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000462_010 Hb_000462_010 Hb_005678_020 Hb_005678_020 Hb_000462_010--Hb_005678_020 Hb_005010_030 Hb_005010_030 Hb_000462_010--Hb_005010_030 Hb_009315_010 Hb_009315_010 Hb_000462_010--Hb_009315_010 Hb_005843_010 Hb_005843_010 Hb_000462_010--Hb_005843_010 Hb_001711_140 Hb_001711_140 Hb_000462_010--Hb_001711_140 Hb_036790_110 Hb_036790_110 Hb_000462_010--Hb_036790_110 Hb_005678_020--Hb_005843_010 Hb_005678_020--Hb_009315_010 Hb_005678_020--Hb_005010_030 Hb_005678_020--Hb_036790_110 Hb_000708_020 Hb_000708_020 Hb_005678_020--Hb_000708_020 Hb_005010_030--Hb_001711_140 Hb_002477_190 Hb_002477_190 Hb_005010_030--Hb_002477_190 Hb_006615_090 Hb_006615_090 Hb_005010_030--Hb_006615_090 Hb_005010_030--Hb_005843_010 Hb_009315_010--Hb_001711_140 Hb_009315_010--Hb_005843_010 Hb_009315_010--Hb_036790_110 Hb_009315_010--Hb_005010_030 Hb_005843_010--Hb_000708_020 Hb_005066_040 Hb_005066_040 Hb_005843_010--Hb_005066_040 Hb_001711_140--Hb_002477_190 Hb_029587_010 Hb_029587_010 Hb_001711_140--Hb_029587_010 Hb_001711_140--Hb_005843_010 Hb_005288_100 Hb_005288_100 Hb_036790_110--Hb_005288_100 Hb_036790_110--Hb_005843_010 Hb_003008_020 Hb_003008_020 Hb_036790_110--Hb_003008_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0632823 0.119462 0.27208 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.391239

CAGE analysis