Hb_000392_200

Information

Type -
Description -
Location Contig392: 191800-192787
Sequence    

Annotation

kegg
ID gmx:100811080
description cytochrome P450 98A2-like
nr
ID XP_008786871.1
description PREDICTED: cytochrome P450 98A2-like isoform X2 [Phoenix dactylifera]
swissprot
ID O48922
description Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1
trembl
ID Q5IDT9
description Coumarate 3-hydroxylase (Fragment) OS=Pinus taeda PE=3 SV=1
Gene Ontology
ID GO:0005506
description coumarate 3- partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000392_200 0.0 - - PREDICTED: cytochrome P450 98A2-like isoform X2 [Phoenix dactylifera]
2 Hb_001049_080 0.0724117324 - - -
3 Hb_023226_050 0.1194325384 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
4 Hb_007632_150 0.1816635885 - - conserved hypothetical protein [Ricinus communis]
5 Hb_086922_010 0.1984904387 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
6 Hb_162304_010 0.219595613 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000006_020 0.2413833259 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000015_240 0.2413833259 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000016_090 0.2413833259 - - -
10 Hb_000016_240 0.2413833259 transcription factor TF Family: LOB hypothetical protein POPTR_0012s13910g [Populus trichocarpa]
11 Hb_000028_020 0.2413833259 - - -
12 Hb_000028_300 0.2413833259 - - hypothetical protein 0_13835_01, partial [Pinus radiata]
13 Hb_000031_310 0.2413833259 transcription factor TF Family: Orphans hypothetical protein [Trichormus azollae]
14 Hb_000037_100 0.2413833259 - - nucleic acid binding protein, putative [Ricinus communis]
15 Hb_000045_030 0.2413833259 - - -
16 Hb_000048_130 0.2413833259 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
17 Hb_000056_050 0.2413833259 - - PREDICTED: uncharacterized protein LOC104117826 [Nicotiana tomentosiformis]
18 Hb_000070_150 0.2413833259 - - hypothetical protein POPTR_0004s19980g [Populus trichocarpa]
19 Hb_000077_340 0.2413833259 - - -
20 Hb_000080_040 0.2413833259 - - -

Gene co-expression network

sample Hb_000392_200 Hb_000392_200 Hb_001049_080 Hb_001049_080 Hb_000392_200--Hb_001049_080 Hb_023226_050 Hb_023226_050 Hb_000392_200--Hb_023226_050 Hb_007632_150 Hb_007632_150 Hb_000392_200--Hb_007632_150 Hb_086922_010 Hb_086922_010 Hb_000392_200--Hb_086922_010 Hb_162304_010 Hb_162304_010 Hb_000392_200--Hb_162304_010 Hb_000006_020 Hb_000006_020 Hb_000392_200--Hb_000006_020 Hb_001049_080--Hb_007632_150 Hb_001049_080--Hb_086922_010 Hb_001049_080--Hb_023226_050 Hb_135811_030 Hb_135811_030 Hb_001049_080--Hb_135811_030 Hb_069877_010 Hb_069877_010 Hb_001049_080--Hb_069877_010 Hb_000375_270 Hb_000375_270 Hb_023226_050--Hb_000375_270 Hb_023226_050--Hb_000006_020 Hb_000015_240 Hb_000015_240 Hb_023226_050--Hb_000015_240 Hb_000016_090 Hb_000016_090 Hb_023226_050--Hb_000016_090 Hb_007632_150--Hb_086922_010 Hb_007632_150--Hb_135811_030 Hb_007632_150--Hb_069877_010 Hb_000429_060 Hb_000429_060 Hb_007632_150--Hb_000429_060 Hb_113444_010 Hb_113444_010 Hb_007632_150--Hb_113444_010 Hb_086922_010--Hb_135811_030 Hb_086922_010--Hb_069877_010 Hb_086922_010--Hb_000429_060 Hb_086922_010--Hb_113444_010 Hb_005015_040 Hb_005015_040 Hb_162304_010--Hb_005015_040 Hb_009554_020 Hb_009554_020 Hb_162304_010--Hb_009554_020 Hb_007970_030 Hb_007970_030 Hb_162304_010--Hb_007970_030 Hb_148146_030 Hb_148146_030 Hb_162304_010--Hb_148146_030 Hb_182291_020 Hb_182291_020 Hb_162304_010--Hb_182291_020 Hb_000116_340 Hb_000116_340 Hb_162304_010--Hb_000116_340 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000016_240 Hb_000016_240 Hb_000006_020--Hb_000016_240 Hb_000028_020 Hb_000028_020 Hb_000006_020--Hb_000028_020 Hb_000028_300 Hb_000028_300 Hb_000006_020--Hb_000028_300 Hb_000031_310 Hb_000031_310 Hb_000006_020--Hb_000031_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0368243 0 0.292677 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis