Hb_007632_150

Information

Type -
Description -
Location Contig7632: 152270-152548
Sequence    

Annotation

kegg
ID rcu:RCOM_0521890
description hypothetical protein
nr
ID XP_002522744.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9S5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0521890 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007632_150 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_086922_010 0.0172312408 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
3 Hb_135811_030 0.0993992298 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_069877_010 0.1040243123 - - chaperone protein DNAj, putative [Ricinus communis]
5 Hb_001049_080 0.1104321275 - - -
6 Hb_000429_060 0.121309529 - - conserved hypothetical protein [Ricinus communis]
7 Hb_113444_010 0.139305139 - - -
8 Hb_001959_230 0.1484524942 - - PREDICTED: uncharacterized protein LOC105638436 [Jatropha curcas]
9 Hb_174245_020 0.1688416358 - - -
10 Hb_000392_200 0.1816635885 - - PREDICTED: cytochrome P450 98A2-like isoform X2 [Phoenix dactylifera]
11 Hb_001761_110 0.2302205024 - - Contains similarity to Cf-2.2 gene gb
12 Hb_131101_010 0.2345161005 - - -
13 Hb_023226_050 0.2465800275 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
14 Hb_014720_060 0.2495145007 - - hypothetical protein JCGZ_11469 [Jatropha curcas]
15 Hb_000441_010 0.2502236101 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
16 Hb_002545_030 0.2550452448 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_002450_160 0.2878387497 - - PREDICTED: protein 108 [Jatropha curcas]
18 Hb_000964_160 0.2953774789 - - PREDICTED: uncharacterized protein LOC102617979 isoform X2 [Citrus sinensis]
19 Hb_003897_020 0.2975123298 transcription factor TF Family: Orphans transcription factor, putative [Ricinus communis]
20 Hb_007245_010 0.2987058199 - - PREDICTED: uncharacterized protein LOC104783698 [Camelina sativa]

Gene co-expression network

sample Hb_007632_150 Hb_007632_150 Hb_086922_010 Hb_086922_010 Hb_007632_150--Hb_086922_010 Hb_135811_030 Hb_135811_030 Hb_007632_150--Hb_135811_030 Hb_069877_010 Hb_069877_010 Hb_007632_150--Hb_069877_010 Hb_001049_080 Hb_001049_080 Hb_007632_150--Hb_001049_080 Hb_000429_060 Hb_000429_060 Hb_007632_150--Hb_000429_060 Hb_113444_010 Hb_113444_010 Hb_007632_150--Hb_113444_010 Hb_086922_010--Hb_135811_030 Hb_086922_010--Hb_069877_010 Hb_086922_010--Hb_000429_060 Hb_086922_010--Hb_113444_010 Hb_086922_010--Hb_001049_080 Hb_135811_030--Hb_069877_010 Hb_135811_030--Hb_000429_060 Hb_135811_030--Hb_113444_010 Hb_001959_230 Hb_001959_230 Hb_135811_030--Hb_001959_230 Hb_174245_020 Hb_174245_020 Hb_135811_030--Hb_174245_020 Hb_069877_010--Hb_000429_060 Hb_069877_010--Hb_113444_010 Hb_069877_010--Hb_001959_230 Hb_069877_010--Hb_174245_020 Hb_000392_200 Hb_000392_200 Hb_001049_080--Hb_000392_200 Hb_023226_050 Hb_023226_050 Hb_001049_080--Hb_023226_050 Hb_001049_080--Hb_135811_030 Hb_001049_080--Hb_069877_010 Hb_000429_060--Hb_113444_010 Hb_000429_060--Hb_001959_230 Hb_000429_060--Hb_174245_020 Hb_113444_010--Hb_001959_230 Hb_113444_010--Hb_174245_020 Hb_001761_110 Hb_001761_110 Hb_113444_010--Hb_001761_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.192921 0 0.498165 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis