Hb_000164_060

Information

Type -
Description -
Location Contig164: 71229-72410
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000164_060 0.0 - - -
2 Hb_147793_010 0.2043749842 - - PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Jatropha curcas]
3 Hb_000111_020 0.2066100215 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
4 Hb_185736_010 0.2083296041 - - -
5 Hb_001627_030 0.2104207597 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
6 Hb_007273_010 0.2105318413 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
7 Hb_187134_010 0.2124149402 - - -
8 Hb_000892_020 0.2149551061 - - unnamed protein product [Vitis vinifera]
9 Hb_096292_010 0.2204155129 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
10 Hb_051067_010 0.2255427709 - - -
11 Hb_001729_040 0.2261060303 - - hypothetical protein glysoja_049826, partial [Glycine soja]
12 Hb_000002_200 0.2276785333 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
13 Hb_015220_010 0.2322217096 - - PREDICTED: ribonuclease 3-like protein 3 [Jatropha curcas]
14 Hb_006277_070 0.2343351587 - - conserved hypothetical protein [Ricinus communis]
15 Hb_015057_030 0.2399193727 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-52, partial [Jatropha curcas]
16 Hb_034661_020 0.2404000662 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
17 Hb_000622_320 0.2526898839 - - PREDICTED: chitinase 1-like [Vitis vinifera]
18 Hb_011016_040 0.2529235826 - - calcium-dependent protein kinase, putative [Ricinus communis]
19 Hb_000143_040 0.2529374064 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
20 Hb_000258_190 0.2532570758 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000164_060 Hb_000164_060 Hb_147793_010 Hb_147793_010 Hb_000164_060--Hb_147793_010 Hb_000111_020 Hb_000111_020 Hb_000164_060--Hb_000111_020 Hb_185736_010 Hb_185736_010 Hb_000164_060--Hb_185736_010 Hb_001627_030 Hb_001627_030 Hb_000164_060--Hb_001627_030 Hb_007273_010 Hb_007273_010 Hb_000164_060--Hb_007273_010 Hb_187134_010 Hb_187134_010 Hb_000164_060--Hb_187134_010 Hb_000002_200 Hb_000002_200 Hb_147793_010--Hb_000002_200 Hb_147793_010--Hb_001627_030 Hb_034661_020 Hb_034661_020 Hb_147793_010--Hb_034661_020 Hb_147793_010--Hb_000111_020 Hb_096292_010 Hb_096292_010 Hb_147793_010--Hb_096292_010 Hb_147793_010--Hb_185736_010 Hb_000111_020--Hb_001627_030 Hb_000111_020--Hb_185736_010 Hb_000111_020--Hb_007273_010 Hb_000111_020--Hb_187134_010 Hb_000111_020--Hb_000002_200 Hb_000111_020--Hb_096292_010 Hb_185736_010--Hb_007273_010 Hb_185736_010--Hb_187134_010 Hb_185736_010--Hb_001627_030 Hb_185736_010--Hb_096292_010 Hb_011016_040 Hb_011016_040 Hb_185736_010--Hb_011016_040 Hb_001627_030--Hb_000002_200 Hb_001627_030--Hb_007273_010 Hb_001627_030--Hb_096292_010 Hb_001627_030--Hb_034661_020 Hb_007273_010--Hb_187134_010 Hb_007273_010--Hb_096292_010 Hb_007273_010--Hb_011016_040 Hb_187134_010--Hb_011016_040 Hb_000143_040 Hb_000143_040 Hb_187134_010--Hb_000143_040 Hb_000258_190 Hb_000258_190 Hb_187134_010--Hb_000258_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0383733 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.370202 0 0.0605647 0

CAGE analysis