Hb_000137_120

Information

Type -
Description -
Location Contig137: 164723-165085
Sequence    

Annotation

kegg
ID rcu:RCOM_1212060
description Nonspecific lipid-transfer protein precursor, putative
nr
ID KDP45156.1
description hypothetical protein JCGZ_15021 [Jatropha curcas]
swissprot
ID Q41073
description Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1
trembl
ID A0A067L9M5
description Non-specific lipid-transfer protein OS=Jatropha curcas GN=JCGZ_15021 PE=3 SV=1
Gene Ontology
ID GO:0006810
description nonspecific lipid-transfer protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000137_120 0.0 - - hypothetical protein JCGZ_15021 [Jatropha curcas]
2 Hb_002311_420 0.0071586083 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
3 Hb_000286_120 0.0298140741 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
4 Hb_143373_010 0.0301362193 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Gossypium raimondii]
5 Hb_000101_230 0.0306887317 - - hypothetical protein CICLE_v10030840mg [Citrus clementina]
6 Hb_005375_080 0.0380365329 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
7 Hb_025311_010 0.0405843645 - - -
8 Hb_020178_030 0.042760869 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000107_020 0.0437987607 - - PREDICTED: uncharacterized protein LOC105032542 [Elaeis guineensis]
10 Hb_000500_250 0.0447075055 - - hypothetical protein CISIN_1g006096mg [Citrus sinensis]
11 Hb_007674_020 0.0521886781 - - PREDICTED: serpin-ZX-like [Jatropha curcas]
12 Hb_000272_080 0.0550933675 - - temperature-induced lipocalin [Populus tremula x Populus tremuloides]
13 Hb_002105_060 0.0564990179 - - hypothetical protein POPTR_0022s00320g [Populus trichocarpa]
14 Hb_078038_010 0.064938668 - - hypothetical protein CISIN_1g038197mg [Citrus sinensis]
15 Hb_005162_050 0.0736846522 - - hypothetical protein B456_009G352100 [Gossypium raimondii]
16 Hb_005653_010 0.0810841144 - - CEN-like protein 2 [Jatropha curcas]
17 Hb_151052_010 0.0811733609 - - -
18 Hb_000917_040 0.08259774 - - PREDICTED: uncharacterized protein LOC105639996 [Jatropha curcas]
19 Hb_112765_010 0.0850455633 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004713_040 0.0868760696 - - hypothetical protein JCGZ_22567 [Jatropha curcas]

Gene co-expression network

sample Hb_000137_120 Hb_000137_120 Hb_002311_420 Hb_002311_420 Hb_000137_120--Hb_002311_420 Hb_000286_120 Hb_000286_120 Hb_000137_120--Hb_000286_120 Hb_143373_010 Hb_143373_010 Hb_000137_120--Hb_143373_010 Hb_000101_230 Hb_000101_230 Hb_000137_120--Hb_000101_230 Hb_005375_080 Hb_005375_080 Hb_000137_120--Hb_005375_080 Hb_025311_010 Hb_025311_010 Hb_000137_120--Hb_025311_010 Hb_002311_420--Hb_000286_120 Hb_002311_420--Hb_000101_230 Hb_002311_420--Hb_005375_080 Hb_002311_420--Hb_025311_010 Hb_020178_030 Hb_020178_030 Hb_002311_420--Hb_020178_030 Hb_000286_120--Hb_000101_230 Hb_000286_120--Hb_005375_080 Hb_000286_120--Hb_025311_010 Hb_000286_120--Hb_020178_030 Hb_000500_250 Hb_000500_250 Hb_000286_120--Hb_000500_250 Hb_000107_020 Hb_000107_020 Hb_143373_010--Hb_000107_020 Hb_007674_020 Hb_007674_020 Hb_143373_010--Hb_007674_020 Hb_000272_080 Hb_000272_080 Hb_143373_010--Hb_000272_080 Hb_002105_060 Hb_002105_060 Hb_143373_010--Hb_002105_060 Hb_078038_010 Hb_078038_010 Hb_143373_010--Hb_078038_010 Hb_000101_230--Hb_005375_080 Hb_000101_230--Hb_025311_010 Hb_000101_230--Hb_020178_030 Hb_000101_230--Hb_000500_250 Hb_005375_080--Hb_025311_010 Hb_005375_080--Hb_020178_030 Hb_005375_080--Hb_000500_250 Hb_025311_010--Hb_020178_030 Hb_025311_010--Hb_000500_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.424212 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.322292

CAGE analysis