Hb_002311_420

Information

Type -
Description -
Location Contig2311: 220648-221000
Sequence    

Annotation

kegg
ID rcu:RCOM_0682120
description hypothetical protein
nr
ID KDP27839.1
description hypothetical protein JCGZ_18919 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7P9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18919 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002311_420 0.0 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
2 Hb_000137_120 0.0071586083 - - hypothetical protein JCGZ_15021 [Jatropha curcas]
3 Hb_000286_120 0.0226572358 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
4 Hb_000101_230 0.0235320165 - - hypothetical protein CICLE_v10030840mg [Citrus clementina]
5 Hb_005375_080 0.0308810156 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
6 Hb_025311_010 0.0334293313 - - -
7 Hb_020178_030 0.0356062775 - - conserved hypothetical protein [Ricinus communis]
8 Hb_143373_010 0.0372919597 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Gossypium raimondii]
9 Hb_000500_250 0.0375533312 - - hypothetical protein CISIN_1g006096mg [Citrus sinensis]
10 Hb_000107_020 0.0509517016 - - PREDICTED: uncharacterized protein LOC105032542 [Elaeis guineensis]
11 Hb_007674_020 0.059339443 - - PREDICTED: serpin-ZX-like [Jatropha curcas]
12 Hb_000272_080 0.0622432986 - - temperature-induced lipocalin [Populus tremula x Populus tremuloides]
13 Hb_002105_060 0.0636485306 - - hypothetical protein POPTR_0022s00320g [Populus trichocarpa]
14 Hb_078038_010 0.0720854656 - - hypothetical protein CISIN_1g038197mg [Citrus sinensis]
15 Hb_005653_010 0.0739416837 - - CEN-like protein 2 [Jatropha curcas]
16 Hb_151052_010 0.0740309686 - - -
17 Hb_005162_050 0.0808282695 - - hypothetical protein B456_009G352100 [Gossypium raimondii]
18 Hb_112765_010 0.0879263888 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004713_040 0.0884937094 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
20 Hb_000917_040 0.0897377334 - - PREDICTED: uncharacterized protein LOC105639996 [Jatropha curcas]

Gene co-expression network

sample Hb_002311_420 Hb_002311_420 Hb_000137_120 Hb_000137_120 Hb_002311_420--Hb_000137_120 Hb_000286_120 Hb_000286_120 Hb_002311_420--Hb_000286_120 Hb_000101_230 Hb_000101_230 Hb_002311_420--Hb_000101_230 Hb_005375_080 Hb_005375_080 Hb_002311_420--Hb_005375_080 Hb_025311_010 Hb_025311_010 Hb_002311_420--Hb_025311_010 Hb_020178_030 Hb_020178_030 Hb_002311_420--Hb_020178_030 Hb_000137_120--Hb_000286_120 Hb_143373_010 Hb_143373_010 Hb_000137_120--Hb_143373_010 Hb_000137_120--Hb_000101_230 Hb_000137_120--Hb_005375_080 Hb_000137_120--Hb_025311_010 Hb_000286_120--Hb_000101_230 Hb_000286_120--Hb_005375_080 Hb_000286_120--Hb_025311_010 Hb_000286_120--Hb_020178_030 Hb_000500_250 Hb_000500_250 Hb_000286_120--Hb_000500_250 Hb_000101_230--Hb_005375_080 Hb_000101_230--Hb_025311_010 Hb_000101_230--Hb_020178_030 Hb_000101_230--Hb_000500_250 Hb_005375_080--Hb_025311_010 Hb_005375_080--Hb_020178_030 Hb_005375_080--Hb_000500_250 Hb_025311_010--Hb_020178_030 Hb_025311_010--Hb_000500_250 Hb_020178_030--Hb_000500_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 1.05366 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.773693

CAGE analysis