Gene annotation
Transcriptome id Sobic.004G202500.1,Sobic.004G202500.2,Sobic.004G202500.3,Sobic.004G202500.4
Synonym Sb04g024880, AME1, FC2, AFC2
Functional annotation serine/threonine-protein kinase AFC2, putative, expressed
UniProt A0A194YQT0 , A0A194YQP3 , A7XW60 , A0A194YQP0 , A0A194YRU5
Pfam PF07714
Panther DB PTHR24058 PTHR24058:SF52
NCBI CDD KOG0671; LAMMER dual specificity kinases
KEGG Orthology K08287; dual-specificity kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G24740 : FUS3-complementing gene 2
RAP-DB (Rice) LOC_Os12g27520.1 : serine/threonine-protein kinase AFC2, putative, expressed
MaizeGDB (Corn) Zm00025a021308 , Zm00025a031847
Brachypodium KQK00168 , KQJ91559 , KQK04092
Barley HORVU6Hr1G053760.5 , HORVU6Hr1G053760.4 , HORVU6Hr1G053760.7 , HORVU6Hr1G053760.1 , HORVU6Hr1G053760.2 , HORVU6Hr1G053760.8 , HORVU5Hr1G091970.9 , HORVU5Hr1G091970.2 , HORVU5Hr1G091970.5 , HORVU5Hr1G091970.7 , HORVU5Hr1G091970.6 , HORVU6Hr1G053760.58 , HORVU6Hr1G053760.55 , HORVU6Hr1G053760.51 , HORVU6Hr1G053760.54 , HORVU6Hr1G053760.57 , HORVU6Hr1G053760.56 , HORVU6Hr1G053760.50 , HORVU6Hr1G053760.52 , HORVU5Hr1G091970.28 , HORVU5Hr1G091970.21 , HORVU5Hr1G091970.23 , HORVU5Hr1G091970.24 , HORVU5Hr1G091970.25 , HORVU5Hr1G091970.26 , HORVU5Hr1G091970.27 , HORVU6Hr1G053760.49 , HORVU6Hr1G053760.42 , HORVU6Hr1G053760.40 , HORVU6Hr1G053760.41 , HORVU6Hr1G053760.46 , HORVU6Hr1G053760.47 , HORVU6Hr1G053760.45 , HORVU5Hr1G091970.19 , HORVU5Hr1G091970.18 , HORVU5Hr1G091970.15 , HORVU5Hr1G091970.17 , HORVU5Hr1G091970.16 , HORVU5Hr1G091970.11 , HORVU5Hr1G091970.10 , HORVU5Hr1G091970.13 , HORVU5Hr1G091970.12 , HORVU6Hr1G053760.39 , HORVU6Hr1G053760.38 , HORVU6Hr1G053760.37 , HORVU6Hr1G053760.35 , HORVU6Hr1G053760.34 , HORVU6Hr1G053760.33 , HORVU6Hr1G053760.32 , HORVU6Hr1G053760.31 , HORVU6Hr1G053760.30 , HORVU6Hr1G053760.28 , HORVU6Hr1G053760.29 , HORVU6Hr1G053760.25 , HORVU6Hr1G053760.26 , HORVU6Hr1G053760.27 , HORVU6Hr1G053760.21 , HORVU6Hr1G053760.22 , HORVU6Hr1G053760.23 , HORVU6Hr1G053760.15 , HORVU6Hr1G053760.16 , HORVU6Hr1G053760.11 , HORVU6Hr1G053760.10 , HORVU6Hr1G053760.13 , HORVU6Hr1G053760.12 , HORVU6Hr1G053760.14 , HORVU6Hr1G053760.19 , HORVU6Hr1G053760.18
Wheat TraesCS5B02G371800 , TraesCS5B02G371800 , TraesCS5A02G369500 , TraesCS5A02G369500 , TraesCS6D02G193300 , TraesCS6D02G193300 , TraesCS6B02G238900 , TraesCS6B02G238900 , TraesCS6B02G238900 , TraesCS6A02G210100 , TraesCS6A02G210100 , TraesCS5D02G378900 , TraesCS5D02G378900
Populus PNT10247 , PNT01138 , PNT01137 , PNT10248 , PNT10246


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cDNA sequences
Sobic.004G202500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
2 Sobic.010G278200 expressed protein -
3 Sobic.003G099100 ZOS9-05 - C2H2 zinc finger protein, expressed -
4 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
5 Sobic.001G193300 TBC domain containing protein, expressed -
6 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
7 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
8 Sobic.007G093800 expressed protein -
9 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
10 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
11 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
12 Sobic.004G307600 ATP-binding domain-containing protein, putative, expressed K14168: CTU1, cytoplasmic tRNA 2-thiolation protein 1
13 Sobic.004G115350 - K12843: PRPF3, U4/U6 small nuclear ribonucleoprotein PRP3
14 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
15 Sobic.001G085100 expressed protein -
16 Sobic.009G222500 expressed protein -
17 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
19 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
20 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M


Gene co-expression network
sample Sobic004G202500 Sobic004G202500 Sobic004G066200 Sobic004G066200 Sobic004G202500--Sobic004G066200 Sobic010G278200 Sobic010G278200 Sobic004G202500--Sobic010G278200 Sobic003G099100 Sobic003G099100 Sobic004G202500--Sobic003G099100 Sobic008G124900 Sobic008G124900 Sobic004G202500--Sobic008G124900 Sobic001G193300 Sobic001G193300 Sobic004G202500--Sobic001G193300 Sobic006G101700 Sobic006G101700 Sobic004G202500--Sobic006G101700 Sobic001G007000 Sobic001G007000 Sobic004G202500--Sobic001G007000 Sobic007G093800 Sobic007G093800 Sobic004G202500--Sobic007G093800 Sobic010G130000 Sobic010G130000 Sobic004G202500--Sobic010G130000 Sobic001G356600 Sobic001G356600 Sobic004G066200--Sobic001G356600 Sobic009G228700 Sobic009G228700 Sobic004G066200--Sobic009G228700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic009G138100 Sobic009G138100 Sobic010G278200--Sobic009G138100 Sobic010G278200--Sobic010G130000 Sobic001G124200 Sobic001G124200 Sobic010G278200--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic010G278200--Sobic008G124900 Sobic009G123600 Sobic009G123600 Sobic003G099100--Sobic009G123600 Sobic002G385900 Sobic002G385900 Sobic003G099100--Sobic002G385900 Sobic003G099100--Sobic004G202500 Sobic009G222500 Sobic009G222500 Sobic003G099100--Sobic009G222500 Sobic010G027600 Sobic010G027600 Sobic003G099100--Sobic010G027600 Sobic009G135600 Sobic009G135600 Sobic003G099100--Sobic009G135600 Sobic006G049700 Sobic006G049700 Sobic003G099100--Sobic006G049700 Sobic003G099100--Sobic010G278200 Sobic004G115350 Sobic004G115350 Sobic003G099100--Sobic004G115350 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic001G096000 Sobic001G096000 Sobic008G124900--Sobic001G096000 Sobic008G124900--Sobic010G278200 Sobic006G131000 Sobic006G131000 Sobic008G124900--Sobic006G131000 Sobic003G104000 Sobic003G104000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic001G193300--Sobic009G068500 Sobic008G089100 Sobic008G089100 Sobic001G193300--Sobic008G089100 Sobic004G257100 Sobic004G257100 Sobic001G193300--Sobic004G257100 Sobic002G359400 Sobic002G359400 Sobic001G193300--Sobic002G359400 Sobic008G033500 Sobic008G033500 Sobic001G193300--Sobic008G033500 Sobic001G193300--Sobic004G202500 Sobic003G176000 Sobic003G176000 Sobic001G193300--Sobic003G176000 Sobic001G193300--Sobic001G007000 Sobic001G193300--Sobic008G124900 Sobic006G101700--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic006G101700--Sobic001G080700 Sobic006G101700--Sobic009G222500 Sobic009G165800 Sobic009G165800 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic001G007000--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G007000--Sobic010G251000 Sobic001G007000--Sobic001G392300 Sobic001G007000--Sobic002G359400 Sobic001G007000--Sobic004G353200 Sobic010G205800 Sobic010G205800 Sobic001G007000--Sobic010G205800 Sobic008G046500 Sobic008G046500 Sobic001G007000--Sobic008G046500 Sobic001G007000--Sobic001G080700 Sobic001G031100 Sobic001G031100 Sobic001G007000--Sobic001G031100 Sobic007G093800--Sobic008G124900 Sobic007G093800--Sobic006G131000 Sobic004G178200 Sobic004G178200 Sobic007G093800--Sobic004G178200 Sobic007G093800--Sobic009G068500 Sobic007G093800--Sobic008G046500 Sobic007G093800--Sobic010G278200 Sobic003G264100 Sobic003G264100 Sobic007G093800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic007G093800--Sobic004G092500 Sobic007G218000 Sobic007G218000 Sobic007G093800--Sobic007G218000 Sobic010G130000--Sobic006G033200 Sobic010G130000--Sobic010G278200 Sobic010G130000--Sobic009G138100 Sobic006G034000 Sobic006G034000 Sobic010G130000--Sobic006G034000 Sobic003G312200 Sobic003G312200 Sobic010G130000--Sobic003G312200 Sobic010G130000--Sobic001G124200 Sobic001G390800 Sobic001G390800 Sobic010G130000--Sobic001G390800 Sobic010G130000--Sobic001G085100 Sobic010G130000--Sobic008G124900
Octagon: transcription factors


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