Gene annotation
Transcriptome id Sobic.008G047400.1,Sobic.008G047400.2
Synonym TLP1, AtTLP1, Sb08g004000
Functional annotation OsFBT14 - F-box and tubby domain containing protein, expressed
UniProt A0A1B6PBC9
Pfam PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF43
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G76900 : tubby like protein 1
RAP-DB (Rice) LOC_Os12g06630.2 : OsFBT14 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053998 , Zm00025a034171
Brachypodium PNT64127 , KQJ92126 , KQJ89302 , KQJ89301
Barley HORVU6Hr1G068970.6 , HORVU6Hr1G068970.5 , HORVU6Hr1G068970.2 , HORVU6Hr1G068970.3 , HORVU6Hr1G068970.1 , HORVU6Hr1G068970.7 , HORVU6Hr1G068970.4 , HORVU5Hr1G040000.7 , HORVU5Hr1G040000.6 , HORVU5Hr1G040000.5 , HORVU5Hr1G040000.4 , HORVU5Hr1G040000.3 , HORVU5Hr1G040000.2 , HORVU5Hr1G040000.1 , HORVU5Hr1G040000.9 , HORVU3Hr1G083290.5 , HORVU3Hr1G083290.4 , HORVU3Hr1G083290.7 , HORVU3Hr1G083290.6 , HORVU3Hr1G083290.1 , HORVU3Hr1G083290.3 , HORVU3Hr1G083290.2 , HORVU4Hr1G020110.4 , HORVU4Hr1G020110.5 , HORVU4Hr1G020110.2 , HORVU4Hr1G020110.3 , HORVU4Hr1G020110.1
Wheat TraesCS7B02G227000 , TraesCS4B02G112600 , TraesCS5A02G124100 , TraesCS5D02G132000 , TraesCS5B02G123800 , TraesCS7D02G323100 , TraesCS4D02G110100 , TraesCS2A02G574000 , TraesCS4A02G209000
Populus PNT48240 , PNT48241 , PNT48239 , PNT48238


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
2 Sobic.010G278200 expressed protein -
3 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
4 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
5 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -
6 Sobic.010G074300 smr domain containing protein, expressed -
7 Sobic.004G255700 sucrase-related, putative, expressed -
8 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
9 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
10 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
12 Sobic.006G092400 calmodulin binding protein, putative, expressed -
13 Sobic.002G343300 zinc finger family protein, putative, expressed -
14 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
15 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
16 Sobic.009G068500 expressed protein -
17 Sobic.007G093800 expressed protein -
18 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
19 Sobic.008G152600 LIM domain-containing protein, putative, expressed -
20 Sobic.001G070000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin


Gene co-expression network
sample Sobic008G047400 Sobic008G047400 Sobic008G124900 Sobic008G124900 Sobic008G047400--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic008G047400--Sobic010G278200 Sobic006G033200 Sobic006G033200 Sobic008G047400--Sobic006G033200 Sobic004G202500 Sobic004G202500 Sobic008G047400--Sobic004G202500 Sobic003G302900 Sobic003G302900 Sobic008G047400--Sobic003G302900 Sobic010G074300 Sobic010G074300 Sobic008G047400--Sobic010G074300 Sobic004G255700 Sobic004G255700 Sobic008G047400--Sobic004G255700 Sobic010G147100 Sobic010G147100 Sobic008G047400--Sobic010G147100 Sobic003G309200 Sobic003G309200 Sobic008G047400--Sobic003G309200 Sobic007G093800 Sobic007G093800 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic001G096000 Sobic001G096000 Sobic008G124900--Sobic001G096000 Sobic008G124900--Sobic010G278200 Sobic006G131000 Sobic006G131000 Sobic008G124900--Sobic006G131000 Sobic003G104000 Sobic003G104000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic010G278200--Sobic010G147100 Sobic009G138100 Sobic009G138100 Sobic010G278200--Sobic009G138100 Sobic010G130000 Sobic010G130000 Sobic010G278200--Sobic010G130000 Sobic001G124200 Sobic001G124200 Sobic010G278200--Sobic001G124200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic010G278200--Sobic008G124900 Sobic006G033200--Sobic010G130000 Sobic006G033200--Sobic008G124900 Sobic006G033200--Sobic010G278200 Sobic006G033200--Sobic009G138100 Sobic006G033200--Sobic007G093800 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic006G033200--Sobic003G302900 Sobic003G312200 Sobic003G312200 Sobic006G033200--Sobic003G312200 Sobic004G066200 Sobic004G066200 Sobic004G202500--Sobic004G066200 Sobic004G202500--Sobic010G278200 Sobic003G099100 Sobic003G099100 Sobic004G202500--Sobic003G099100 Sobic004G202500--Sobic008G124900 Sobic001G193300 Sobic001G193300 Sobic004G202500--Sobic001G193300 Sobic006G101700 Sobic006G101700 Sobic004G202500--Sobic006G101700 Sobic001G007000 Sobic001G007000 Sobic004G202500--Sobic001G007000 Sobic004G202500--Sobic007G093800 Sobic004G202500--Sobic010G130000 Sobic003G302900--Sobic006G033200 Sobic002G311100 Sobic002G311100 Sobic003G302900--Sobic002G311100 Sobic003G302900--Sobic010G147100 Sobic001G107600 Sobic001G107600 Sobic003G302900--Sobic001G107600 Sobic003G302900--Sobic010G278200 Sobic007G203300 Sobic007G203300 Sobic003G302900--Sobic007G203300 Sobic003G264100 Sobic003G264100 Sobic003G302900--Sobic003G264100 Sobic003G302900--Sobic008G047400 Sobic008G093000 Sobic008G093000 Sobic003G302900--Sobic008G093000 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic004G255700--Sobic008G047400 Sobic002G343300 Sobic002G343300 Sobic004G255700--Sobic002G343300 Sobic004G255700--Sobic001G193300 Sobic009G135900 Sobic009G135900 Sobic004G255700--Sobic009G135900 Sobic001G446200 Sobic001G446200 Sobic004G255700--Sobic001G446200 Sobic004G255700--Sobic006G033200 Sobic004G255700--Sobic004G202500 Sobic006G034500 Sobic006G034500 Sobic004G255700--Sobic006G034500 Sobic009G219900 Sobic009G219900 Sobic004G255700--Sobic009G219900 Sobic010G147100--Sobic003G316500 Sobic010G147100--Sobic010G278200 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic010G147100--Sobic001G390800 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic010G147100--Sobic003G118200 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100
Octagon: transcription factors


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