Hb_152021_010

Information

Type -
Description -
Location Contig152021: 2-564
Sequence    

Annotation

kegg
ID cic:CICLE_v10009973mg
description hypothetical protein
nr
ID XP_012078715.1
description PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7Z4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13281 PE=4 SV=1
Gene Ontology
ID GO:0043231
description PREDICTED: uncharacterized protein LOC105639312 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152021_010 0.0 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
2 Hb_000215_180 0.1089596158 - - hypothetical protein 17 [Hevea brasiliensis]
3 Hb_000896_120 0.1141398475 - - PREDICTED: acyl-protein thioesterase 2-like [Populus euphratica]
4 Hb_000922_100 0.1214931359 - - PREDICTED: putative exosome complex component rrp40 [Jatropha curcas]
5 Hb_183086_040 0.1243645029 - - cytochrome b5 isoform Cb5-A [Vernicia fordii]
6 Hb_002014_160 0.1311337457 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor C-1 [Jatropha curcas]
7 Hb_001377_380 0.1364123646 - - PREDICTED: uncharacterized protein LOC105642831 [Jatropha curcas]
8 Hb_000780_210 0.1365780562 - - PREDICTED: transmembrane protein 256 homolog [Jatropha curcas]
9 Hb_001545_060 0.1394928954 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
10 Hb_004333_030 0.1455507282 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Jatropha curcas]
11 Hb_000398_160 0.1466420305 - - GDP-mannose transporter, putative [Ricinus communis]
12 Hb_000635_080 0.1478903521 - - 60S ribosomal protein L17A [Hevea brasiliensis]
13 Hb_001623_430 0.1486171892 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
14 Hb_003702_080 0.1519084092 - - cysteine protease, putative [Ricinus communis]
15 Hb_009838_040 0.1519621972 - - hypothetical protein JCGZ_12866 [Jatropha curcas]
16 Hb_000722_040 0.1529737748 - - -
17 Hb_000300_390 0.1534811675 - - BTB/POZ domain-containing protein KCTD9, putative [Ricinus communis]
18 Hb_004041_040 0.1536099881 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Camelina sativa]
19 Hb_005663_120 0.1554933426 - - PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas]
20 Hb_000367_210 0.1557542894 - - PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Jatropha curcas]

Gene co-expression network

sample Hb_152021_010 Hb_152021_010 Hb_000215_180 Hb_000215_180 Hb_152021_010--Hb_000215_180 Hb_000896_120 Hb_000896_120 Hb_152021_010--Hb_000896_120 Hb_000922_100 Hb_000922_100 Hb_152021_010--Hb_000922_100 Hb_183086_040 Hb_183086_040 Hb_152021_010--Hb_183086_040 Hb_002014_160 Hb_002014_160 Hb_152021_010--Hb_002014_160 Hb_001377_380 Hb_001377_380 Hb_152021_010--Hb_001377_380 Hb_000215_180--Hb_183086_040 Hb_000215_180--Hb_000922_100 Hb_000780_210 Hb_000780_210 Hb_000215_180--Hb_000780_210 Hb_000215_180--Hb_001377_380 Hb_000215_180--Hb_000896_120 Hb_000106_100 Hb_000106_100 Hb_000215_180--Hb_000106_100 Hb_000896_120--Hb_183086_040 Hb_000896_120--Hb_000922_100 Hb_000300_390 Hb_000300_390 Hb_000896_120--Hb_000300_390 Hb_001232_140 Hb_001232_140 Hb_000896_120--Hb_001232_140 Hb_005663_120 Hb_005663_120 Hb_000896_120--Hb_005663_120 Hb_000922_100--Hb_183086_040 Hb_000329_330 Hb_000329_330 Hb_000922_100--Hb_000329_330 Hb_000722_040 Hb_000722_040 Hb_000922_100--Hb_000722_040 Hb_001545_060 Hb_001545_060 Hb_000922_100--Hb_001545_060 Hb_183086_040--Hb_000780_210 Hb_000085_330 Hb_000085_330 Hb_183086_040--Hb_000085_330 Hb_000224_090 Hb_000224_090 Hb_183086_040--Hb_000224_090 Hb_002014_160--Hb_000922_100 Hb_002014_160--Hb_001545_060 Hb_002014_160--Hb_000896_120 Hb_001278_050 Hb_001278_050 Hb_002014_160--Hb_001278_050 Hb_002014_160--Hb_000215_180 Hb_001377_380--Hb_000780_210 Hb_000635_080 Hb_000635_080 Hb_001377_380--Hb_000635_080 Hb_002316_120 Hb_002316_120 Hb_001377_380--Hb_002316_120 Hb_004545_130 Hb_004545_130 Hb_001377_380--Hb_004545_130 Hb_000789_110 Hb_000789_110 Hb_001377_380--Hb_000789_110 Hb_001377_380--Hb_000300_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.767531 0.190432 0.29211 1.40881 1.05186 0.965737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.4973 6.14517 3.68523 1.50388 0

CAGE analysis