Hb_126024_010

Information

Type -
Description -
Location Contig126024: 2-163
Sequence    

Annotation

kegg
ID rcu:RCOM_1427590
description aldo/keto reductase, putative (EC:1.1.1.65)
nr
ID XP_011004263.1
description PREDICTED: probable aldo-keto reductase 1 [Populus euphratica]
swissprot
ID Q3L181
description Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1
trembl
ID B9REP6
description Aldo/keto reductase, putative OS=Ricinus communis GN=RCOM_1427590 PE=4 SV=1
Gene Ontology
ID GO:0050236
description aldo keto

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126024_010 0.0 - - PREDICTED: probable aldo-keto reductase 1 [Populus euphratica]
2 Hb_011909_130 0.1122103553 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
3 Hb_011639_130 0.1143719741 - - mads box protein, putative [Ricinus communis]
4 Hb_004829_050 0.1146818112 - - hypothetical protein TRIUR3_09654 [Triticum urartu]
5 Hb_000484_050 0.1154222346 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
6 Hb_001403_100 0.116694398 - - hypothetical protein CICLE_v10017457mg, partial [Citrus clementina]
7 Hb_001104_260 0.1168249921 - - hypothetical protein JCGZ_23628 [Jatropha curcas]
8 Hb_007658_030 0.1174878429 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
9 Hb_000871_020 0.1175308395 - - receptor-kinase, putative [Ricinus communis]
10 Hb_000284_060 0.1183378153 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
11 Hb_006353_010 0.118524044 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
12 Hb_005204_030 0.1201499072 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
13 Hb_008078_040 0.1217475741 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
14 Hb_000756_040 0.1222945348 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_000764_060 0.1239984274 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
16 Hb_007676_070 0.1246373897 - - PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Populus euphratica]
17 Hb_004940_090 0.1250906715 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
18 Hb_030593_010 0.1252944185 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
19 Hb_068447_010 0.1263093267 - - protein with unknown function [Ricinus communis]
20 Hb_009740_010 0.1267289107 - - receptor-kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_126024_010 Hb_126024_010 Hb_011909_130 Hb_011909_130 Hb_126024_010--Hb_011909_130 Hb_011639_130 Hb_011639_130 Hb_126024_010--Hb_011639_130 Hb_004829_050 Hb_004829_050 Hb_126024_010--Hb_004829_050 Hb_000484_050 Hb_000484_050 Hb_126024_010--Hb_000484_050 Hb_001403_100 Hb_001403_100 Hb_126024_010--Hb_001403_100 Hb_001104_260 Hb_001104_260 Hb_126024_010--Hb_001104_260 Hb_011909_130--Hb_000484_050 Hb_007658_030 Hb_007658_030 Hb_011909_130--Hb_007658_030 Hb_011909_130--Hb_011639_130 Hb_011909_130--Hb_004829_050 Hb_011909_130--Hb_001403_100 Hb_011909_130--Hb_001104_260 Hb_011639_130--Hb_004829_050 Hb_011639_130--Hb_001403_100 Hb_011639_130--Hb_001104_260 Hb_005204_030 Hb_005204_030 Hb_011639_130--Hb_005204_030 Hb_008078_040 Hb_008078_040 Hb_011639_130--Hb_008078_040 Hb_000756_040 Hb_000756_040 Hb_011639_130--Hb_000756_040 Hb_004829_050--Hb_001403_100 Hb_004829_050--Hb_001104_260 Hb_004829_050--Hb_005204_030 Hb_004829_050--Hb_008078_040 Hb_004829_050--Hb_000756_040 Hb_000484_050--Hb_007658_030 Hb_030593_010 Hb_030593_010 Hb_000484_050--Hb_030593_010 Hb_034558_010 Hb_034558_010 Hb_000484_050--Hb_034558_010 Hb_001766_090 Hb_001766_090 Hb_000484_050--Hb_001766_090 Hb_000484_050--Hb_011639_130 Hb_001403_100--Hb_001104_260 Hb_001403_100--Hb_005204_030 Hb_001403_100--Hb_008078_040 Hb_001403_100--Hb_000756_040 Hb_001104_260--Hb_005204_030 Hb_001104_260--Hb_008078_040 Hb_001104_260--Hb_000756_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 301.45 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 4.48877 33.5018 3.99292

CAGE analysis