Hb_005204_030

Information

Type -
Description -
Location Contig5204: 47078-48686
Sequence    

Annotation

kegg
ID mtr:MTR_8g067690
description Lectin-domain containing receptor kinase A4.2
nr
ID XP_012068410.1
description PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
swissprot
ID Q9C5S8
description Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1
trembl
ID A0A067L9H6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03649 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005204_030 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
2 Hb_008078_040 0.0041926895 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
3 Hb_000756_040 0.0055602898 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_000764_060 0.0096381507 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
5 Hb_001104_260 0.0100706852 - - hypothetical protein JCGZ_23628 [Jatropha curcas]
6 Hb_001403_100 0.0105195315 - - hypothetical protein CICLE_v10017457mg, partial [Citrus clementina]
7 Hb_007676_070 0.0111049139 - - PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Populus euphratica]
8 Hb_068447_010 0.0148066414 - - protein with unknown function [Ricinus communis]
9 Hb_004829_050 0.0182965706 - - hypothetical protein TRIUR3_09654 [Triticum urartu]
10 Hb_011639_130 0.0196916216 - - mads box protein, putative [Ricinus communis]
11 Hb_011924_010 0.0275075819 - - hypothetical protein, partial [Phaeodactylibacter xiamenensis]
12 Hb_101778_020 0.0343947177 transcription factor TF Family: SRS conserved hypothetical protein [Ricinus communis]
13 Hb_006586_020 0.0386809757 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
14 Hb_000123_320 0.0460150814 - - PREDICTED: MADS-box protein FLOWERING LOCUS C-like [Jatropha curcas]
15 Hb_003430_010 0.0475141132 - - xyloglucan endotransglucosylase/hydrolase protein 33 precursor [Populus trichocarpa]
16 Hb_001271_040 0.053462572 - - hypothetical protein POPTR_0019s039903g, partial [Populus trichocarpa]
17 Hb_003392_020 0.0540694226 - - PREDICTED: uncharacterized protein LOC105650609 [Jatropha curcas]
18 Hb_006011_060 0.0547513441 - - -
19 Hb_011909_130 0.0562405236 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
20 Hb_008248_010 0.0625702251 - - -

Gene co-expression network

sample Hb_005204_030 Hb_005204_030 Hb_008078_040 Hb_008078_040 Hb_005204_030--Hb_008078_040 Hb_000756_040 Hb_000756_040 Hb_005204_030--Hb_000756_040 Hb_000764_060 Hb_000764_060 Hb_005204_030--Hb_000764_060 Hb_001104_260 Hb_001104_260 Hb_005204_030--Hb_001104_260 Hb_001403_100 Hb_001403_100 Hb_005204_030--Hb_001403_100 Hb_007676_070 Hb_007676_070 Hb_005204_030--Hb_007676_070 Hb_008078_040--Hb_000756_040 Hb_008078_040--Hb_000764_060 Hb_008078_040--Hb_007676_070 Hb_068447_010 Hb_068447_010 Hb_008078_040--Hb_068447_010 Hb_008078_040--Hb_001104_260 Hb_000756_040--Hb_000764_060 Hb_000756_040--Hb_007676_070 Hb_000756_040--Hb_068447_010 Hb_000756_040--Hb_001104_260 Hb_000764_060--Hb_007676_070 Hb_000764_060--Hb_068447_010 Hb_011924_010 Hb_011924_010 Hb_000764_060--Hb_011924_010 Hb_001104_260--Hb_001403_100 Hb_004829_050 Hb_004829_050 Hb_001104_260--Hb_004829_050 Hb_011639_130 Hb_011639_130 Hb_001104_260--Hb_011639_130 Hb_001403_100--Hb_004829_050 Hb_001403_100--Hb_011639_130 Hb_001403_100--Hb_008078_040 Hb_001403_100--Hb_000756_040 Hb_007676_070--Hb_068447_010 Hb_007676_070--Hb_011924_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0829959 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0128231 0

CAGE analysis