Hb_121451_010

Information

Type -
Description -
Location Contig121451: 71-2553
Sequence    

Annotation

kegg
ID tcc:TCM_045983
description Gag protease polyprotein-like protein
nr
ID XP_012077902.1
description PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0MQD4
description Phosphate import ATP-binding PstB 2 OS=Gossypium arboreum GN=F383_30012 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121451_010 0.0 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
2 Hb_002794_020 0.0007562475 - - PREDICTED: cytochrome P450 89A2-like [Jatropha curcas]
3 Hb_001408_190 0.0008024105 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
4 Hb_166645_010 0.000863316 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105123834 [Populus euphratica]
5 Hb_006150_040 0.0009369552 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
6 Hb_008673_010 0.0010685074 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
7 Hb_012595_030 0.0014153853 - - -
8 Hb_071517_010 0.0017121301 - - hypothetical protein CICLE_v10010288mg, partial [Citrus clementina]
9 Hb_004346_020 0.0017514858 - - conserved hypothetical protein [Ricinus communis]
10 Hb_171554_030 0.0017514858 - - -
11 Hb_032572_020 0.0018945417 - - -
12 Hb_002115_090 0.001938241 - - PREDICTED: uncharacterized protein LOC104590556 [Nelumbo nucifera]
13 Hb_000005_200 0.0019575675 - - -
14 Hb_000172_170 0.0021544652 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
15 Hb_187610_010 0.002309877 - - PREDICTED: uncharacterized protein LOC105785094 [Gossypium raimondii]
16 Hb_003634_020 0.0026375389 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
17 Hb_160953_010 0.0027397535 - - PREDICTED: uncharacterized protein LOC104214925 [Nicotiana sylvestris]
18 Hb_001770_030 0.0030580283 - - hypothetical protein B456_010G041100, partial [Gossypium raimondii]
19 Hb_015036_010 0.0033213206 - - -
20 Hb_001385_030 0.0033214373 - - PREDICTED: uncharacterized protein LOC100852852 [Vitis vinifera]

Gene co-expression network

sample Hb_121451_010 Hb_121451_010 Hb_002794_020 Hb_002794_020 Hb_121451_010--Hb_002794_020 Hb_001408_190 Hb_001408_190 Hb_121451_010--Hb_001408_190 Hb_166645_010 Hb_166645_010 Hb_121451_010--Hb_166645_010 Hb_006150_040 Hb_006150_040 Hb_121451_010--Hb_006150_040 Hb_008673_010 Hb_008673_010 Hb_121451_010--Hb_008673_010 Hb_012595_030 Hb_012595_030 Hb_121451_010--Hb_012595_030 Hb_002794_020--Hb_001408_190 Hb_002794_020--Hb_166645_010 Hb_002794_020--Hb_008673_010 Hb_002794_020--Hb_012595_030 Hb_004346_020 Hb_004346_020 Hb_002794_020--Hb_004346_020 Hb_001408_190--Hb_166645_010 Hb_001408_190--Hb_008673_010 Hb_001408_190--Hb_012595_030 Hb_001408_190--Hb_004346_020 Hb_166645_010--Hb_008673_010 Hb_166645_010--Hb_012595_030 Hb_166645_010--Hb_004346_020 Hb_071517_010 Hb_071517_010 Hb_006150_040--Hb_071517_010 Hb_000005_200 Hb_000005_200 Hb_006150_040--Hb_000005_200 Hb_000172_170 Hb_000172_170 Hb_006150_040--Hb_000172_170 Hb_187610_010 Hb_187610_010 Hb_006150_040--Hb_187610_010 Hb_006150_040--Hb_002794_020 Hb_008673_010--Hb_012595_030 Hb_008673_010--Hb_004346_020 Hb_171554_030 Hb_171554_030 Hb_008673_010--Hb_171554_030 Hb_012595_030--Hb_004346_020 Hb_012595_030--Hb_171554_030 Hb_032572_020 Hb_032572_020 Hb_012595_030--Hb_032572_020 Hb_002115_090 Hb_002115_090 Hb_012595_030--Hb_002115_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0102859 0.0537847

CAGE analysis