Hb_002794_020

Information

Type -
Description -
Location Contig2794: 27671-29242
Sequence    

Annotation

kegg
ID rcu:RCOM_0380830
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012084591.1
description PREDICTED: cytochrome P450 89A2-like [Jatropha curcas]
swissprot
ID Q42602
description Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2
trembl
ID A0A067K6B9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20178 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 89a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002794_020 0.0 - - PREDICTED: cytochrome P450 89A2-like [Jatropha curcas]
2 Hb_001408_190 4.61631e-05 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
3 Hb_166645_010 0.0001070686 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105123834 [Populus euphratica]
4 Hb_008673_010 0.0003122601 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
5 Hb_012595_030 0.0006591384 - - -
6 Hb_121451_010 0.0007562475 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
7 Hb_004346_020 0.0009952396 - - conserved hypothetical protein [Ricinus communis]
8 Hb_171554_030 0.0009952396 - - -
9 Hb_032572_020 0.0011382958 - - -
10 Hb_002115_090 0.0011819952 - - PREDICTED: uncharacterized protein LOC104590556 [Nelumbo nucifera]
11 Hb_006150_040 0.0016932015 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
12 Hb_001770_030 0.0023017859 - - hypothetical protein B456_010G041100, partial [Gossypium raimondii]
13 Hb_071517_010 0.0024683746 - - hypothetical protein CICLE_v10010288mg, partial [Citrus clementina]
14 Hb_005617_050 0.0025654214 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105167812 [Sesamum indicum]
15 Hb_000005_200 0.0027138112 - - -
16 Hb_001579_120 0.0027321093 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_000172_170 0.0029107083 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
18 Hb_187610_010 0.0030661195 - - PREDICTED: uncharacterized protein LOC105785094 [Gossypium raimondii]
19 Hb_015337_010 0.0030979829 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_013781_010 0.0031328542 - - hypothetical protein VITISV_030726 [Vitis vinifera]

Gene co-expression network

sample Hb_002794_020 Hb_002794_020 Hb_001408_190 Hb_001408_190 Hb_002794_020--Hb_001408_190 Hb_166645_010 Hb_166645_010 Hb_002794_020--Hb_166645_010 Hb_008673_010 Hb_008673_010 Hb_002794_020--Hb_008673_010 Hb_012595_030 Hb_012595_030 Hb_002794_020--Hb_012595_030 Hb_121451_010 Hb_121451_010 Hb_002794_020--Hb_121451_010 Hb_004346_020 Hb_004346_020 Hb_002794_020--Hb_004346_020 Hb_001408_190--Hb_166645_010 Hb_001408_190--Hb_008673_010 Hb_001408_190--Hb_012595_030 Hb_001408_190--Hb_121451_010 Hb_001408_190--Hb_004346_020 Hb_166645_010--Hb_008673_010 Hb_166645_010--Hb_012595_030 Hb_166645_010--Hb_121451_010 Hb_166645_010--Hb_004346_020 Hb_008673_010--Hb_012595_030 Hb_008673_010--Hb_004346_020 Hb_171554_030 Hb_171554_030 Hb_008673_010--Hb_171554_030 Hb_012595_030--Hb_004346_020 Hb_012595_030--Hb_171554_030 Hb_032572_020 Hb_032572_020 Hb_012595_030--Hb_032572_020 Hb_002115_090 Hb_002115_090 Hb_012595_030--Hb_002115_090 Hb_006150_040 Hb_006150_040 Hb_121451_010--Hb_006150_040 Hb_121451_010--Hb_008673_010 Hb_121451_010--Hb_012595_030 Hb_004346_020--Hb_171554_030 Hb_004346_020--Hb_032572_020 Hb_004346_020--Hb_002115_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00928772 0.0488016

CAGE analysis