Hb_102179_020

Information

Type -
Description -
Location Contig102179: 21950-23171
Sequence    

Annotation

kegg
ID rcu:RCOM_0841220
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012086046.1
description PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID A0A067K6P0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20024 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_102179_020 0.0 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
2 Hb_000397_180 0.0013500145 - - -
3 Hb_002007_030 0.0014121195 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000813_110 0.0092425837 - - PREDICTED: uncharacterized protein LOC104884346 [Beta vulgaris subsp. vulgaris]
5 Hb_007227_020 0.0123844217 - - -
6 Hb_000679_180 0.012803593 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_006663_120 0.0131007111 - - ATP binding protein, putative [Ricinus communis]
8 Hb_001002_010 0.0143048416 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000803_280 0.0149656273 - - PREDICTED: uncharacterized protein LOC105648326 [Jatropha curcas]
10 Hb_001491_080 0.0158129734 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002217_010 0.0192256268 - - Peroxiredoxin, putative [Ricinus communis]
12 Hb_003018_220 0.0194185485 - - Snakin-2 [Gossypium arboreum]
13 Hb_004918_020 0.0197410138 - - -
14 Hb_000471_130 0.0201195561 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000002_020 0.0214029083 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
16 Hb_156212_010 0.0221592702 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
17 Hb_000340_170 0.0222441834 - - PREDICTED: GDSL esterase/lipase At1g54790-like [Jatropha curcas]
18 Hb_090521_010 0.022596836 - - Major allergen Pru ar, putative [Ricinus communis]
19 Hb_036116_010 0.0243065999 - - JHL22C18.10 [Jatropha curcas]
20 Hb_131748_010 0.0280398044 - - hypothetical protein PRUPE_ppa022115mg [Prunus persica]

Gene co-expression network

sample Hb_102179_020 Hb_102179_020 Hb_000397_180 Hb_000397_180 Hb_102179_020--Hb_000397_180 Hb_002007_030 Hb_002007_030 Hb_102179_020--Hb_002007_030 Hb_000813_110 Hb_000813_110 Hb_102179_020--Hb_000813_110 Hb_007227_020 Hb_007227_020 Hb_102179_020--Hb_007227_020 Hb_000679_180 Hb_000679_180 Hb_102179_020--Hb_000679_180 Hb_006663_120 Hb_006663_120 Hb_102179_020--Hb_006663_120 Hb_000397_180--Hb_002007_030 Hb_000397_180--Hb_000813_110 Hb_000803_280 Hb_000803_280 Hb_000397_180--Hb_000803_280 Hb_000397_180--Hb_007227_020 Hb_000397_180--Hb_000679_180 Hb_002007_030--Hb_000813_110 Hb_002007_030--Hb_007227_020 Hb_002007_030--Hb_000679_180 Hb_002007_030--Hb_006663_120 Hb_000813_110--Hb_000803_280 Hb_001491_080 Hb_001491_080 Hb_000813_110--Hb_001491_080 Hb_003018_220 Hb_003018_220 Hb_000813_110--Hb_003018_220 Hb_004918_020 Hb_004918_020 Hb_000813_110--Hb_004918_020 Hb_007227_020--Hb_000679_180 Hb_007227_020--Hb_006663_120 Hb_001002_010 Hb_001002_010 Hb_007227_020--Hb_001002_010 Hb_002217_010 Hb_002217_010 Hb_007227_020--Hb_002217_010 Hb_000471_130 Hb_000471_130 Hb_007227_020--Hb_000471_130 Hb_090521_010 Hb_090521_010 Hb_007227_020--Hb_090521_010 Hb_000679_180--Hb_006663_120 Hb_000679_180--Hb_001002_010 Hb_000679_180--Hb_002217_010 Hb_000679_180--Hb_000471_130 Hb_000679_180--Hb_090521_010 Hb_006663_120--Hb_001002_010 Hb_006663_120--Hb_002217_010 Hb_006663_120--Hb_000471_130 Hb_006663_120--Hb_090521_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0317358 0.175426 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis