Hb_054102_010

Information

Type -
Description -
Location Contig54102: 137-742
Sequence    

Annotation

kegg
ID rcu:RCOM_1675600
description abhydrolase domain containing, putative
nr
ID XP_002509492.1
description abhydrolase domain containing, putative [Ricinus communis]
swissprot
ID Q8IUS5
description Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
trembl
ID B9RBF8
description Abhydrolase domain containing, putative OS=Ricinus communis GN=RCOM_1675600 PE=4 SV=1
Gene Ontology
ID GO:0016787
description epoxide hydrolase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_054102_010 0.0 - - abhydrolase domain containing, putative [Ricinus communis]
2 Hb_001213_010 0.0057910606 - - PREDICTED: laccase-7 [Jatropha curcas]
3 Hb_148383_010 0.0128021005 - - PREDICTED: protein YLS9 [Jatropha curcas]
4 Hb_000576_080 0.0244060976 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000720_010 0.0357581379 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
6 Hb_011161_060 0.063468852 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
7 Hb_000671_010 0.0666406127 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
8 Hb_002757_050 0.078172859 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
9 Hb_006153_190 0.087636994 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
10 Hb_000115_180 0.0899653689 - - hypothetical protein RCOM_1308310 [Ricinus communis]
11 Hb_001863_050 0.0933690602 - - PREDICTED: wall-associated receptor kinase-like 8 [Jatropha curcas]
12 Hb_000205_290 0.0939304984 - - -
13 Hb_126535_010 0.0995569408 - - hypothetical protein JCGZ_09554 [Jatropha curcas]
14 Hb_175167_020 0.0996019442 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006142_010 0.0996190977 - - hypothetical protein CICLE_v10013815mg, partial [Citrus clementina]
16 Hb_001901_040 0.1165324625 - - hypothetical protein CARUB_v10027638mg [Capsella rubella]
17 Hb_002231_140 0.1210702755 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
18 Hb_000948_040 0.1212934572 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
19 Hb_000028_540 0.1231841754 - - hypothetical protein POPTR_0012s03720g [Populus trichocarpa]
20 Hb_156683_010 0.1251356322 - - PREDICTED: uncharacterized protein At5g65660-like [Jatropha curcas]

Gene co-expression network

sample Hb_054102_010 Hb_054102_010 Hb_001213_010 Hb_001213_010 Hb_054102_010--Hb_001213_010 Hb_148383_010 Hb_148383_010 Hb_054102_010--Hb_148383_010 Hb_000576_080 Hb_000576_080 Hb_054102_010--Hb_000576_080 Hb_000720_010 Hb_000720_010 Hb_054102_010--Hb_000720_010 Hb_011161_060 Hb_011161_060 Hb_054102_010--Hb_011161_060 Hb_000671_010 Hb_000671_010 Hb_054102_010--Hb_000671_010 Hb_001213_010--Hb_148383_010 Hb_001213_010--Hb_000720_010 Hb_001213_010--Hb_000576_080 Hb_001213_010--Hb_011161_060 Hb_001213_010--Hb_000671_010 Hb_148383_010--Hb_000576_080 Hb_148383_010--Hb_000720_010 Hb_148383_010--Hb_011161_060 Hb_000115_180 Hb_000115_180 Hb_148383_010--Hb_000115_180 Hb_000576_080--Hb_000720_010 Hb_000576_080--Hb_000115_180 Hb_001863_050 Hb_001863_050 Hb_000576_080--Hb_001863_050 Hb_000720_010--Hb_011161_060 Hb_000720_010--Hb_000671_010 Hb_002757_050 Hb_002757_050 Hb_000720_010--Hb_002757_050 Hb_011161_060--Hb_000671_010 Hb_011161_060--Hb_002757_050 Hb_000205_290 Hb_000205_290 Hb_011161_060--Hb_000205_290 Hb_000948_040 Hb_000948_040 Hb_011161_060--Hb_000948_040 Hb_000671_010--Hb_002757_050 Hb_000671_010--Hb_000205_290 Hb_000671_010--Hb_000948_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0464215 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.256393 0

CAGE analysis