Hb_033843_010

Information

Type -
Description -
Location Contig33843: 588-1051
Sequence    

Annotation

kegg
ID mdm:103438842
description cell division control protein 2 homolog
nr
ID XP_012065857.1
description PREDICTED: cell division control protein 2 homolog A isoform X1 [Jatropha curcas]
swissprot
ID P93101
description Cell division control protein 2 homolog OS=Oxybasis rubra GN=CDC2 PE=2 SV=1
trembl
ID A0A067LGA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22741 PE=4 SV=1
Gene Ontology
ID GO:0005829
description cell division control protein 2 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35397: 255-1333
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033843_010 0.0 - - PREDICTED: cell division control protein 2 homolog A isoform X1 [Jatropha curcas]
2 Hb_000465_430 0.0633017255 - - PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
3 Hb_003502_080 0.0647074242 - - vacuolar protein sorting, putative [Ricinus communis]
4 Hb_003058_130 0.0651110295 - - PREDICTED: protein N-lysine methyltransferase METTL21A isoform X1 [Jatropha curcas]
5 Hb_001006_170 0.0716867533 - - Endonuclease V, putative [Ricinus communis]
6 Hb_033153_050 0.0727450559 transcription factor TF Family: VOZ conserved hypothetical protein [Ricinus communis]
7 Hb_003392_040 0.0728881107 - - PREDICTED: D-aminoacyl-tRNA deacylase [Jatropha curcas]
8 Hb_001252_100 0.0732396051 - - PREDICTED: CASP-like protein 5B2 [Jatropha curcas]
9 Hb_001635_170 0.0739417188 - - hypothetical protein JCGZ_24811 [Jatropha curcas]
10 Hb_002685_140 0.0748349404 - - PREDICTED: membrin-11 [Jatropha curcas]
11 Hb_000327_120 0.0755120621 - - FGFR1 oncogene partner, putative [Ricinus communis]
12 Hb_029920_050 0.0766621435 - - PREDICTED: putative HVA22-like protein g [Jatropha curcas]
13 Hb_007951_060 0.0766745999 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
14 Hb_011689_080 0.0772116157 - - PREDICTED: uncharacterized protein LOC105631867 [Jatropha curcas]
15 Hb_005306_110 0.0786258722 - - casein kinase, putative [Ricinus communis]
16 Hb_007594_030 0.0797067247 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
17 Hb_009838_090 0.0804887165 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
18 Hb_004324_310 0.081169694 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003001_120 0.0825373239 - - PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Jatropha curcas]
20 Hb_005503_030 0.0827234313 - - PREDICTED: protein SCO1 homolog 1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_033843_010 Hb_033843_010 Hb_000465_430 Hb_000465_430 Hb_033843_010--Hb_000465_430 Hb_003502_080 Hb_003502_080 Hb_033843_010--Hb_003502_080 Hb_003058_130 Hb_003058_130 Hb_033843_010--Hb_003058_130 Hb_001006_170 Hb_001006_170 Hb_033843_010--Hb_001006_170 Hb_033153_050 Hb_033153_050 Hb_033843_010--Hb_033153_050 Hb_003392_040 Hb_003392_040 Hb_033843_010--Hb_003392_040 Hb_012092_010 Hb_012092_010 Hb_000465_430--Hb_012092_010 Hb_002495_040 Hb_002495_040 Hb_000465_430--Hb_002495_040 Hb_000465_430--Hb_003502_080 Hb_005016_170 Hb_005016_170 Hb_000465_430--Hb_005016_170 Hb_000092_100 Hb_000092_100 Hb_000465_430--Hb_000092_100 Hb_003502_080--Hb_005016_170 Hb_023001_050 Hb_023001_050 Hb_003502_080--Hb_023001_050 Hb_021409_020 Hb_021409_020 Hb_003502_080--Hb_021409_020 Hb_000204_040 Hb_000204_040 Hb_003502_080--Hb_000204_040 Hb_003058_130--Hb_003392_040 Hb_011689_080 Hb_011689_080 Hb_003058_130--Hb_011689_080 Hb_000103_560 Hb_000103_560 Hb_003058_130--Hb_000103_560 Hb_002078_150 Hb_002078_150 Hb_003058_130--Hb_002078_150 Hb_039837_010 Hb_039837_010 Hb_003058_130--Hb_039837_010 Hb_000017_120 Hb_000017_120 Hb_001006_170--Hb_000017_120 Hb_168707_030 Hb_168707_030 Hb_001006_170--Hb_168707_030 Hb_005503_030 Hb_005503_030 Hb_001006_170--Hb_005503_030 Hb_002149_020 Hb_002149_020 Hb_001006_170--Hb_002149_020 Hb_000000_080 Hb_000000_080 Hb_001006_170--Hb_000000_080 Hb_001862_190 Hb_001862_190 Hb_033153_050--Hb_001862_190 Hb_005306_110 Hb_005306_110 Hb_033153_050--Hb_005306_110 Hb_007894_140 Hb_007894_140 Hb_033153_050--Hb_007894_140 Hb_001635_170 Hb_001635_170 Hb_033153_050--Hb_001635_170 Hb_029920_050 Hb_029920_050 Hb_033153_050--Hb_029920_050 Hb_000169_010 Hb_000169_010 Hb_003392_040--Hb_000169_010 Hb_003392_040--Hb_011689_080 Hb_000032_570 Hb_000032_570 Hb_003392_040--Hb_000032_570 Hb_001377_290 Hb_001377_290 Hb_003392_040--Hb_001377_290 Hb_000720_120 Hb_000720_120 Hb_003392_040--Hb_000720_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
269.605 81.591 112.285 130.853 218.006 257.446
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
232.95 182.133 169.106 94.2742 42.5799

CAGE analysis