Hb_009742_010

Information

Type -
Description -
Location Contig9742: 2621-2808
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009742_010 0.0 - - -
2 Hb_034569_020 0.1589335041 - - -
3 Hb_000922_310 0.2132950581 transcription factor TF Family: MYB PREDICTED: transcription factor MYB98-like [Jatropha curcas]
4 Hb_004899_280 0.2239918406 - - -
5 Hb_131949_010 0.233411842 - - PREDICTED: uncharacterized protein LOC104227863, partial [Nicotiana sylvestris]
6 Hb_184798_040 0.2357729106 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
7 Hb_012500_010 0.2379250357 - - Ran GTPase binding protein, putative [Ricinus communis]
8 Hb_003362_060 0.2504684356 - - -
9 Hb_010979_010 0.2512213843 - - -
10 Hb_007805_020 0.3071644587 - - -
11 Hb_084426_010 0.3164863625 - - -
12 Hb_137543_010 0.3241697229 - - -
13 Hb_171659_010 0.3385586921 - - PREDICTED: uncharacterized protein LOC104903214 [Beta vulgaris subsp. vulgaris]
14 Hb_171108_010 0.3389975275 - - -
15 Hb_004330_030 0.3402133229 - - -
16 Hb_009693_040 0.3432380397 - - PREDICTED: serine/threonine-protein kinase At3g07070 [Brassica rapa]
17 Hb_003607_030 0.343245526 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor ABI3 [Jatropha curcas]
18 Hb_007963_050 0.3433817599 - - -
19 Hb_001055_040 0.3452345821 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
20 Hb_000171_040 0.3506230739 - - -

Gene co-expression network

sample Hb_009742_010 Hb_009742_010 Hb_034569_020 Hb_034569_020 Hb_009742_010--Hb_034569_020 Hb_000922_310 Hb_000922_310 Hb_009742_010--Hb_000922_310 Hb_004899_280 Hb_004899_280 Hb_009742_010--Hb_004899_280 Hb_131949_010 Hb_131949_010 Hb_009742_010--Hb_131949_010 Hb_184798_040 Hb_184798_040 Hb_009742_010--Hb_184798_040 Hb_012500_010 Hb_012500_010 Hb_009742_010--Hb_012500_010 Hb_034569_020--Hb_000922_310 Hb_034569_020--Hb_004899_280 Hb_034569_020--Hb_131949_010 Hb_010979_010 Hb_010979_010 Hb_034569_020--Hb_010979_010 Hb_034569_020--Hb_184798_040 Hb_000922_310--Hb_004899_280 Hb_046727_010 Hb_046727_010 Hb_000922_310--Hb_046727_010 Hb_080765_020 Hb_080765_020 Hb_000922_310--Hb_080765_020 Hb_000098_280 Hb_000098_280 Hb_000922_310--Hb_000098_280 Hb_007008_020 Hb_007008_020 Hb_000922_310--Hb_007008_020 Hb_004899_280--Hb_131949_010 Hb_005975_020 Hb_005975_020 Hb_004899_280--Hb_005975_020 Hb_003362_060 Hb_003362_060 Hb_004899_280--Hb_003362_060 Hb_131949_010--Hb_003362_060 Hb_084426_010 Hb_084426_010 Hb_131949_010--Hb_084426_010 Hb_131949_010--Hb_184798_040 Hb_000171_040 Hb_000171_040 Hb_131949_010--Hb_000171_040 Hb_184798_040--Hb_003362_060 Hb_184798_040--Hb_000171_040 Hb_184798_040--Hb_004899_280 Hb_012500_010--Hb_184798_040 Hb_085922_010 Hb_085922_010 Hb_012500_010--Hb_085922_010 Hb_000504_250 Hb_000504_250 Hb_012500_010--Hb_000504_250 Hb_137543_010 Hb_137543_010 Hb_012500_010--Hb_137543_010 Hb_155880_010 Hb_155880_010 Hb_012500_010--Hb_155880_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.3173 11.4407 0 0 16.7044 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 3.21598 0 0 0

CAGE analysis