Hb_006355_120

Information

Type -
Description -
Location Contig6355: 142488-143127
Sequence    

Annotation

kegg
ID rcu:RCOM_1721910
description hypothetical protein
nr
ID XP_002521139.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8LFD5
description Uncharacterized protein At4g13230 OS=Arabidopsis thaliana GN=At4g13230 PE=2 SV=1
trembl
ID B9S570
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1721910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006355_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001410_050 0.0050453186 - - putative polyprotein [Oryza sativa Japonica Group]
3 Hb_002259_180 0.0182627094 - - -
4 Hb_002435_020 0.0814052274 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
5 Hb_000069_580 0.1202236796 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005946_180 0.1336415072 - - PREDICTED: uncharacterized protein LOC100818788 [Glycine max]
7 Hb_000139_210 0.1421855183 - - -
8 Hb_000264_330 0.144799148 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
9 Hb_008221_020 0.149025601 - - hypothetical protein JCGZ_15014 [Jatropha curcas]
10 Hb_004970_080 0.1536268055 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
11 Hb_001950_130 0.1559755185 - - -
12 Hb_010534_030 0.1572175361 - - calcineurin-like phosphoesterase [Manihot esculenta]
13 Hb_000752_030 0.1576293279 transcription factor TF Family: bHLH hypothetical protein RCOM_0978110 [Ricinus communis]
14 Hb_011174_030 0.2366877546 - - -
15 Hb_001246_050 0.2665915938 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
16 Hb_001190_050 0.2895591987 - - hypothetical protein JCGZ_20709 [Jatropha curcas]
17 Hb_002791_040 0.2930641025 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
18 Hb_107429_010 0.3113768666 - - PREDICTED: calcium-dependent protein kinase 34 [Jatropha curcas]
19 Hb_000392_460 0.3145250542 - - Pectate lyase precursor, putative [Ricinus communis]
20 Hb_001195_430 0.3148172414 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_006355_120 Hb_006355_120 Hb_001410_050 Hb_001410_050 Hb_006355_120--Hb_001410_050 Hb_002259_180 Hb_002259_180 Hb_006355_120--Hb_002259_180 Hb_002435_020 Hb_002435_020 Hb_006355_120--Hb_002435_020 Hb_000069_580 Hb_000069_580 Hb_006355_120--Hb_000069_580 Hb_005946_180 Hb_005946_180 Hb_006355_120--Hb_005946_180 Hb_000139_210 Hb_000139_210 Hb_006355_120--Hb_000139_210 Hb_001410_050--Hb_002259_180 Hb_001410_050--Hb_002435_020 Hb_001410_050--Hb_000069_580 Hb_001410_050--Hb_005946_180 Hb_001410_050--Hb_000139_210 Hb_002259_180--Hb_002435_020 Hb_002259_180--Hb_000069_580 Hb_008221_020 Hb_008221_020 Hb_002259_180--Hb_008221_020 Hb_002259_180--Hb_005946_180 Hb_002435_020--Hb_000069_580 Hb_002435_020--Hb_008221_020 Hb_001246_050 Hb_001246_050 Hb_002435_020--Hb_001246_050 Hb_000069_580--Hb_008221_020 Hb_000069_580--Hb_001246_050 Hb_005946_180--Hb_000139_210 Hb_000264_330 Hb_000264_330 Hb_005946_180--Hb_000264_330 Hb_004970_080 Hb_004970_080 Hb_005946_180--Hb_004970_080 Hb_001950_130 Hb_001950_130 Hb_005946_180--Hb_001950_130 Hb_010534_030 Hb_010534_030 Hb_005946_180--Hb_010534_030 Hb_000752_030 Hb_000752_030 Hb_005946_180--Hb_000752_030 Hb_000139_210--Hb_000264_330 Hb_000139_210--Hb_004970_080 Hb_000139_210--Hb_001950_130 Hb_000139_210--Hb_010534_030 Hb_000139_210--Hb_000752_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.109378 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.121798 0 0 0

CAGE analysis