Hb_008221_020

Information

Type -
Description -
Location Contig8221: 4523-7623
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP31689.1
description hypothetical protein JCGZ_15014 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15014 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008221_020 0.0 - - hypothetical protein JCGZ_15014 [Jatropha curcas]
2 Hb_000069_580 0.0289911478 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002435_020 0.067915381 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_001246_050 0.1194727775 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
5 Hb_002259_180 0.1308878915 - - -
6 Hb_006355_120 0.149025601 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001410_050 0.1540304811 - - putative polyprotein [Oryza sativa Japonica Group]
8 Hb_008014_060 0.2422906375 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
9 Hb_011174_030 0.2558463086 - - -
10 Hb_004163_020 0.2600509314 - - -
11 Hb_001190_050 0.260758661 - - hypothetical protein JCGZ_20709 [Jatropha curcas]
12 Hb_002791_040 0.2654921713 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
13 Hb_005946_180 0.2807204174 - - PREDICTED: uncharacterized protein LOC100818788 [Glycine max]
14 Hb_000661_210 0.2871318346 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000349_190 0.2883545633 transcription factor TF Family: GRF hypothetical protein POPTR_0001s08310g [Populus trichocarpa]
16 Hb_000139_210 0.2890756112 - - -
17 Hb_000264_330 0.291629837 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
18 Hb_004970_080 0.3002510934 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
19 Hb_001950_130 0.3025433807 - - -
20 Hb_010534_030 0.3037553014 - - calcineurin-like phosphoesterase [Manihot esculenta]

Gene co-expression network

sample Hb_008221_020 Hb_008221_020 Hb_000069_580 Hb_000069_580 Hb_008221_020--Hb_000069_580 Hb_002435_020 Hb_002435_020 Hb_008221_020--Hb_002435_020 Hb_001246_050 Hb_001246_050 Hb_008221_020--Hb_001246_050 Hb_002259_180 Hb_002259_180 Hb_008221_020--Hb_002259_180 Hb_006355_120 Hb_006355_120 Hb_008221_020--Hb_006355_120 Hb_001410_050 Hb_001410_050 Hb_008221_020--Hb_001410_050 Hb_000069_580--Hb_002435_020 Hb_000069_580--Hb_002259_180 Hb_000069_580--Hb_006355_120 Hb_000069_580--Hb_001410_050 Hb_000069_580--Hb_001246_050 Hb_002435_020--Hb_002259_180 Hb_002435_020--Hb_006355_120 Hb_002435_020--Hb_001410_050 Hb_002435_020--Hb_001246_050 Hb_008014_060 Hb_008014_060 Hb_001246_050--Hb_008014_060 Hb_004163_020 Hb_004163_020 Hb_001246_050--Hb_004163_020 Hb_001246_050--Hb_002259_180 Hb_002259_180--Hb_006355_120 Hb_002259_180--Hb_001410_050 Hb_005946_180 Hb_005946_180 Hb_002259_180--Hb_005946_180 Hb_006355_120--Hb_001410_050 Hb_006355_120--Hb_005946_180 Hb_000139_210 Hb_000139_210 Hb_006355_120--Hb_000139_210 Hb_001410_050--Hb_005946_180 Hb_001410_050--Hb_000139_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.617904 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.337334 0 0 0

CAGE analysis