Hb_002426_010

Information

Type -
Description -
Location Contig2426: 12503-17183
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002426_010 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_000510_220 0.0958781342 - - -
3 Hb_004483_020 0.1633622101 - - -
4 Hb_009189_060 0.1837806825 - - PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Jatropha curcas]
5 Hb_089341_010 0.1847206151 - - Uncharacterized protein TCM_018339 [Theobroma cacao]
6 Hb_001031_060 0.2056662724 - - PREDICTED: uncharacterized protein LOC103940329 [Pyrus x bretschneideri]
7 Hb_006634_010 0.2377108772 - - -
8 Hb_001501_040 0.2496733157 - - PREDICTED: uncharacterized protein LOC102663792 [Glycine max]
9 Hb_001303_070 0.2983333772 - - PREDICTED: dnaJ homolog subfamily C GRV2 isoform X2 [Prunus mume]
10 Hb_010447_020 0.3141551304 - - PREDICTED: uncharacterized protein LOC105797464 [Gossypium raimondii]
11 Hb_033926_010 0.3194283249 - - -
12 Hb_001506_030 0.3212410048 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
13 Hb_002003_110 0.3247214184 - - PREDICTED: uncharacterized protein LOC105634406 [Jatropha curcas]
14 Hb_171273_010 0.3287632633 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
15 Hb_009922_010 0.3291836061 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
16 Hb_053643_010 0.3306959305 - - Zinc finger protein GIS2 [Medicago truncatula]
17 Hb_002374_330 0.3318463008 - - -
18 Hb_093432_020 0.3339239869 - - PREDICTED: QWRF motif-containing protein 3 [Jatropha curcas]
19 Hb_002928_070 0.3344384565 - - -
20 Hb_005203_050 0.3529164162 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_002426_010 Hb_002426_010 Hb_000510_220 Hb_000510_220 Hb_002426_010--Hb_000510_220 Hb_004483_020 Hb_004483_020 Hb_002426_010--Hb_004483_020 Hb_009189_060 Hb_009189_060 Hb_002426_010--Hb_009189_060 Hb_089341_010 Hb_089341_010 Hb_002426_010--Hb_089341_010 Hb_001031_060 Hb_001031_060 Hb_002426_010--Hb_001031_060 Hb_006634_010 Hb_006634_010 Hb_002426_010--Hb_006634_010 Hb_000510_220--Hb_001031_060 Hb_001501_040 Hb_001501_040 Hb_000510_220--Hb_001501_040 Hb_000510_220--Hb_009189_060 Hb_000510_220--Hb_004483_020 Hb_000510_220--Hb_006634_010 Hb_004483_020--Hb_089341_010 Hb_004108_010 Hb_004108_010 Hb_004483_020--Hb_004108_010 Hb_093432_020 Hb_093432_020 Hb_004483_020--Hb_093432_020 Hb_002374_330 Hb_002374_330 Hb_004483_020--Hb_002374_330 Hb_009189_060--Hb_006634_010 Hb_171273_010 Hb_171273_010 Hb_009189_060--Hb_171273_010 Hb_009189_060--Hb_001031_060 Hb_048207_010 Hb_048207_010 Hb_009189_060--Hb_048207_010 Hb_002003_110 Hb_002003_110 Hb_089341_010--Hb_002003_110 Hb_001303_070 Hb_001303_070 Hb_089341_010--Hb_001303_070 Hb_137515_010 Hb_137515_010 Hb_089341_010--Hb_137515_010 Hb_061365_010 Hb_061365_010 Hb_089341_010--Hb_061365_010 Hb_001031_060--Hb_001501_040 Hb_001031_060--Hb_006634_010 Hb_007879_010 Hb_007879_010 Hb_001031_060--Hb_007879_010 Hb_006634_010--Hb_171273_010 Hb_006634_010--Hb_048207_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.01104 0.00696548 0 0.0089613 0.00781493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis