Hb_002301_070

Information

Type -
Description -
Location Contig2301: 72053-75210
Sequence    

Annotation

kegg
ID rcu:RCOM_1673220
description Triose phosphate/phosphate translocator, chloroplast precursor, putative
nr
ID XP_012091670.1
description PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
swissprot
ID Q9ZSR7
description Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1
trembl
ID A0A067JB26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21482 PE=4 SV=1
Gene Ontology
ID GO:0009534
description triose phosphate phosphate chloroplastic isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24112: 71973-75514
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_070 0.0 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
2 Hb_000928_260 0.0265477374 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
3 Hb_003787_030 0.0290673514 - - conserved hypothetical protein [Ricinus communis]
4 Hb_010697_020 0.0444646581 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004143_080 0.0493580628 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
6 Hb_000815_120 0.0560163602 - - calcium ion binding protein, putative [Ricinus communis]
7 Hb_006573_240 0.0594579635 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
8 Hb_000704_020 0.0673342734 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003033_020 0.0678314456 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Jatropha curcas]
10 Hb_127349_020 0.0678335452 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
11 Hb_180094_010 0.069454436 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
12 Hb_000883_080 0.0697608898 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_000140_040 0.0713209553 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
14 Hb_046825_010 0.0727390338 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
15 Hb_010666_020 0.0727424883 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
16 Hb_000152_300 0.0731945416 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
17 Hb_154064_010 0.0738958873 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]
18 Hb_000307_100 0.0750999401 - - Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
19 Hb_001348_160 0.0754375593 - - Photosystem II 22 kDa protein, chloroplast precursor, putative [Ricinus communis]
20 Hb_000433_040 0.0764942038 - - -

Gene co-expression network

sample Hb_002301_070 Hb_002301_070 Hb_000928_260 Hb_000928_260 Hb_002301_070--Hb_000928_260 Hb_003787_030 Hb_003787_030 Hb_002301_070--Hb_003787_030 Hb_010697_020 Hb_010697_020 Hb_002301_070--Hb_010697_020 Hb_004143_080 Hb_004143_080 Hb_002301_070--Hb_004143_080 Hb_000815_120 Hb_000815_120 Hb_002301_070--Hb_000815_120 Hb_006573_240 Hb_006573_240 Hb_002301_070--Hb_006573_240 Hb_000928_260--Hb_003787_030 Hb_000928_260--Hb_006573_240 Hb_000928_260--Hb_010697_020 Hb_000883_080 Hb_000883_080 Hb_000928_260--Hb_000883_080 Hb_000928_260--Hb_004143_080 Hb_003787_030--Hb_006573_240 Hb_003787_030--Hb_010697_020 Hb_003787_030--Hb_000815_120 Hb_003787_030--Hb_004143_080 Hb_001348_160 Hb_001348_160 Hb_010697_020--Hb_001348_160 Hb_001191_060 Hb_001191_060 Hb_010697_020--Hb_001191_060 Hb_001269_480 Hb_001269_480 Hb_010697_020--Hb_001269_480 Hb_004143_080--Hb_000815_120 Hb_004818_010 Hb_004818_010 Hb_004143_080--Hb_004818_010 Hb_003093_050 Hb_003093_050 Hb_004143_080--Hb_003093_050 Hb_000704_020 Hb_000704_020 Hb_004143_080--Hb_000704_020 Hb_001951_050 Hb_001951_050 Hb_004143_080--Hb_001951_050 Hb_000815_120--Hb_004818_010 Hb_000815_120--Hb_000704_020 Hb_000815_120--Hb_001951_050 Hb_000815_120--Hb_003093_050 Hb_003033_020 Hb_003033_020 Hb_006573_240--Hb_003033_020 Hb_002329_050 Hb_002329_050 Hb_006573_240--Hb_002329_050 Hb_000307_100 Hb_000307_100 Hb_006573_240--Hb_000307_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.63356 33.5008 36.4225 0.0287665 0.0156714
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140075 0.0275486 0 0.132147 146.376

CAGE analysis