Hb_000661_210

Information

Type -
Description -
Location Contig661: 239183-239914
Sequence    

Annotation

kegg
ID rcu:RCOM_1578740
description hypothetical protein
nr
ID XP_002513527.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RIF8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578740 PE=4 SV=1
Gene Ontology
ID GO:0003824
description uveal autoantigen with coiled-coil domains and ankyrin repeats

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_210 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_008221_020 0.2871318346 - - hypothetical protein JCGZ_15014 [Jatropha curcas]
3 Hb_000069_580 0.287569077 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002435_020 0.2923244966 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
5 Hb_002259_180 0.3095038979 - - -
6 Hb_001246_050 0.3125649137 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
7 Hb_006355_120 0.3164184575 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001410_050 0.3184672894 - - putative polyprotein [Oryza sativa Japonica Group]
9 Hb_000349_190 0.3547709672 transcription factor TF Family: GRF hypothetical protein POPTR_0001s08310g [Populus trichocarpa]
10 Hb_005743_090 0.3587318179 - - -
11 Hb_000866_360 0.3651819602 - - -
12 Hb_008014_060 0.3695009777 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
13 Hb_011174_030 0.3726965537 - - -
14 Hb_001190_050 0.3772721805 - - hypothetical protein JCGZ_20709 [Jatropha curcas]
15 Hb_004163_020 0.3797973864 - - -
16 Hb_002791_040 0.380158975 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
17 Hb_026527_040 0.3842235067 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000111_410 0.3863792957 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005946_180 0.3870261968 - - PREDICTED: uncharacterized protein LOC100818788 [Glycine max]
20 Hb_000139_210 0.392468435 - - -

Gene co-expression network

sample Hb_000661_210 Hb_000661_210 Hb_008221_020 Hb_008221_020 Hb_000661_210--Hb_008221_020 Hb_000069_580 Hb_000069_580 Hb_000661_210--Hb_000069_580 Hb_002435_020 Hb_002435_020 Hb_000661_210--Hb_002435_020 Hb_002259_180 Hb_002259_180 Hb_000661_210--Hb_002259_180 Hb_001246_050 Hb_001246_050 Hb_000661_210--Hb_001246_050 Hb_006355_120 Hb_006355_120 Hb_000661_210--Hb_006355_120 Hb_008221_020--Hb_000069_580 Hb_008221_020--Hb_002435_020 Hb_008221_020--Hb_001246_050 Hb_008221_020--Hb_002259_180 Hb_008221_020--Hb_006355_120 Hb_001410_050 Hb_001410_050 Hb_008221_020--Hb_001410_050 Hb_000069_580--Hb_002435_020 Hb_000069_580--Hb_002259_180 Hb_000069_580--Hb_006355_120 Hb_000069_580--Hb_001410_050 Hb_000069_580--Hb_001246_050 Hb_002435_020--Hb_002259_180 Hb_002435_020--Hb_006355_120 Hb_002435_020--Hb_001410_050 Hb_002435_020--Hb_001246_050 Hb_002259_180--Hb_006355_120 Hb_002259_180--Hb_001410_050 Hb_005946_180 Hb_005946_180 Hb_002259_180--Hb_005946_180 Hb_008014_060 Hb_008014_060 Hb_001246_050--Hb_008014_060 Hb_004163_020 Hb_004163_020 Hb_001246_050--Hb_004163_020 Hb_001246_050--Hb_002259_180 Hb_006355_120--Hb_001410_050 Hb_006355_120--Hb_005946_180 Hb_000139_210 Hb_000139_210 Hb_006355_120--Hb_000139_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.350044 0 0.101197 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.200484 0 0 0

CAGE analysis