Hb_000512_040

Information

Type -
Description -
Location Contig512: 32861-34033
Sequence    

Annotation

kegg
ID pop:POPTR_0015s038701
description POPTRDRAFT_902259; hypothetical protein
nr
ID XP_012075460.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067KGD3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10711 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000512_040 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_000221_170 0.1280853341 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
3 Hb_000876_050 0.1289337204 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
4 Hb_029508_030 0.1324573927 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
5 Hb_011174_100 0.1424753713 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_001709_070 0.1452837188 - - carbohydrate binding protein, putative [Ricinus communis]
7 Hb_004162_040 0.1452924176 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
8 Hb_003878_100 0.1482877833 desease resistance Gene Name: NB-ARC LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
9 Hb_001864_010 0.1530633909 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000177_120 0.162127305 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
11 Hb_000254_150 0.1641845195 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
12 Hb_010813_030 0.1663630008 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
13 Hb_005542_110 0.1679209793 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
14 Hb_001454_160 0.1705408796 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
15 Hb_001623_470 0.1707501219 - - ammonium transporter, putative [Ricinus communis]
16 Hb_124385_010 0.1727112588 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
17 Hb_001252_040 0.1733827898 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
18 Hb_018212_020 0.1747452366 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
19 Hb_002555_020 0.1751221067 - - Receptor-like protein kinase [Medicago truncatula]
20 Hb_001769_030 0.1781181109 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000512_040 Hb_000512_040 Hb_000221_170 Hb_000221_170 Hb_000512_040--Hb_000221_170 Hb_000876_050 Hb_000876_050 Hb_000512_040--Hb_000876_050 Hb_029508_030 Hb_029508_030 Hb_000512_040--Hb_029508_030 Hb_011174_100 Hb_011174_100 Hb_000512_040--Hb_011174_100 Hb_001709_070 Hb_001709_070 Hb_000512_040--Hb_001709_070 Hb_004162_040 Hb_004162_040 Hb_000512_040--Hb_004162_040 Hb_000221_170--Hb_000876_050 Hb_000221_170--Hb_029508_030 Hb_001864_010 Hb_001864_010 Hb_000221_170--Hb_001864_010 Hb_005489_160 Hb_005489_160 Hb_000221_170--Hb_005489_160 Hb_000221_170--Hb_001709_070 Hb_005333_100 Hb_005333_100 Hb_000221_170--Hb_005333_100 Hb_000684_010 Hb_000684_010 Hb_000876_050--Hb_000684_010 Hb_000876_050--Hb_005333_100 Hb_000120_980 Hb_000120_980 Hb_000876_050--Hb_000120_980 Hb_005542_110 Hb_005542_110 Hb_000876_050--Hb_005542_110 Hb_010813_030 Hb_010813_030 Hb_000876_050--Hb_010813_030 Hb_000286_190 Hb_000286_190 Hb_029508_030--Hb_000286_190 Hb_000920_360 Hb_000920_360 Hb_029508_030--Hb_000920_360 Hb_029508_030--Hb_001864_010 Hb_029508_030--Hb_001709_070 Hb_029508_030--Hb_000876_050 Hb_011174_100--Hb_005542_110 Hb_011174_100--Hb_000876_050 Hb_007709_010 Hb_007709_010 Hb_011174_100--Hb_007709_010 Hb_001454_160 Hb_001454_160 Hb_011174_100--Hb_001454_160 Hb_011174_100--Hb_000684_010 Hb_001709_070--Hb_004162_040 Hb_124385_010 Hb_124385_010 Hb_001709_070--Hb_124385_010 Hb_008503_020 Hb_008503_020 Hb_001709_070--Hb_008503_020 Hb_001623_470 Hb_001623_470 Hb_001709_070--Hb_001623_470 Hb_004162_040--Hb_124385_010 Hb_120268_010 Hb_120268_010 Hb_004162_040--Hb_120268_010 Hb_004162_040--Hb_008503_020 Hb_004162_040--Hb_000221_170 Hb_000203_060 Hb_000203_060 Hb_004162_040--Hb_000203_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0192429 1.52912 0.131862 0.0483621 0.0180313 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0692058 0 1.97092 0.499321

CAGE analysis