Gene annotation
Transcriptome id Sobic.009G101300.2,Sobic.009G101300.1
Synonym SNX2b, Sb09g016140
Functional annotation phox domain-containing protein, putative, expressed
UniProt A0A1Z5R1W4 , C5YW84
Pfam PF09325 PF00787
Panther DB PTHR10555 PTHR10555:SF155
NCBI CDD KOG2273; Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07120 : sorting nexin 2B
RAP-DB (Rice) LOC_Os05g27920.1 : phox domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043467 , Zm00025a020322
Brachypodium PNT71521 , PNT71520 , PNT71523 , PNT71522
Barley HORVU1Hr1G060480.5 , HORVU1Hr1G060480.4 , HORVU1Hr1G060480.7 , HORVU1Hr1G060480.6 , HORVU1Hr1G060480.1 , HORVU1Hr1G060480.3 , HORVU1Hr1G060480.2
Wheat TraesCS1D02G223500 , TraesCS1A02G221800 , TraesCS1B02G235000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G058700 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
2 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
3 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
5 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
6 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
8 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
9 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
10 Sobic.002G348600 zinc finger family protein, putative, expressed -
11 Sobic.007G013300 protein kinase family protein, putative, expressed -
12 Sobic.004G261600 expressed protein -
13 Sobic.004G319300 lipase class 3 family protein, putative, expressed -
14 Sobic.004G323700 zinc finger family protein, putative, expressed -
15 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
16 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
17 Sobic.004G357400 beta-catenin-like protein 1, putative, expressed K12864: beta-catenin-like protein 1
18 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
19 Sobic.007G162800 expressed protein -
20 Sobic.007G093800 expressed protein -


Gene co-expression network
sample Sobic009G101300 Sobic009G101300 Sobic002G058700 Sobic002G058700 Sobic009G101300--Sobic002G058700 Sobic001G096000 Sobic001G096000 Sobic009G101300--Sobic001G096000 Sobic001G015800 Sobic001G015800 Sobic009G101300--Sobic001G015800 Sobic008G124900 Sobic008G124900 Sobic009G101300--Sobic008G124900 Sobic009G131900 Sobic009G131900 Sobic009G101300--Sobic009G131900 Sobic001G420800 Sobic001G420800 Sobic009G101300--Sobic001G420800 Sobic003G104000 Sobic003G104000 Sobic009G101300--Sobic003G104000 Sobic001G206900 Sobic001G206900 Sobic009G101300--Sobic001G206900 Sobic007G180600 Sobic007G180600 Sobic009G101300--Sobic007G180600 Sobic002G058700--Sobic009G101300 Sobic002G058700--Sobic001G096000 Sobic007G013300 Sobic007G013300 Sobic002G058700--Sobic007G013300 Sobic001G431000 Sobic001G431000 Sobic002G058700--Sobic001G431000 Sobic010G171100 Sobic010G171100 Sobic002G058700--Sobic010G171100 Sobic001G003500 Sobic001G003500 Sobic002G058700--Sobic001G003500 Sobic002G071000 Sobic002G071000 Sobic002G058700--Sobic002G071000 Sobic004G095300 Sobic004G095300 Sobic002G058700--Sobic004G095300 Sobic004G117800 Sobic004G117800 Sobic002G058700--Sobic004G117800 Sobic006G131000 Sobic006G131000 Sobic001G096000--Sobic006G131000 Sobic001G096000--Sobic008G124900 Sobic006G126100 Sobic006G126100 Sobic001G096000--Sobic006G126100 Sobic003G332500 Sobic003G332500 Sobic001G096000--Sobic003G332500 Sobic001G096000--Sobic003G104000 Sobic003G337300 Sobic003G337300 Sobic001G096000--Sobic003G337300 Sobic001G477700 Sobic001G477700 Sobic001G096000--Sobic001G477700 Sobic001G163400 Sobic001G163400 Sobic001G096000--Sobic001G163400 Sobic001G362200 Sobic001G362200 Sobic001G096000--Sobic001G362200 Sobic001G015800--Sobic001G163400 Sobic001G015800--Sobic008G124900 Sobic001G015800--Sobic003G104000 Sobic003G331400 Sobic003G331400 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic004G286500 Sobic004G286500 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G015800--Sobic001G096000 Sobic001G015800--Sobic003G337300 Sobic007G093800 Sobic007G093800 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic008G124900--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic008G124900--Sobic010G278200 Sobic008G124900--Sobic006G131000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500 Sobic009G131900--Sobic003G104000 Sobic006G270600 Sobic006G270600 Sobic009G131900--Sobic006G270600 Sobic004G316700 Sobic004G316700 Sobic009G131900--Sobic004G316700 Sobic007G042900 Sobic007G042900 Sobic009G131900--Sobic007G042900 Sobic003G182300 Sobic003G182300 Sobic009G131900--Sobic003G182300 Sobic010G235200 Sobic010G235200 Sobic009G131900--Sobic010G235200 Sobic009G131900--Sobic006G131000 Sobic008G129600 Sobic008G129600 Sobic009G131900--Sobic008G129600 Sobic010G264000 Sobic010G264000 Sobic009G131900--Sobic010G264000 Sobic009G226400 Sobic009G226400 Sobic001G420800--Sobic009G226400 Sobic001G420800--Sobic003G337300 Sobic001G420800--Sobic001G096000 Sobic002G299000 Sobic002G299000 Sobic001G420800--Sobic002G299000 SobicK004100 SobicK004100 Sobic001G420800--SobicK004100 Sobic001G420800--Sobic008G124900 Sobic001G449900 Sobic001G449900 Sobic001G420800--Sobic001G449900 Sobic001G261456 Sobic001G261456 Sobic001G420800--Sobic001G261456 Sobic004G092500 Sobic004G092500 Sobic001G420800--Sobic004G092500 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic001G323000 Sobic001G323000 Sobic001G206900--Sobic001G323000 Sobic003G312200 Sobic003G312200 Sobic001G206900--Sobic003G312200 Sobic004G010900 Sobic004G010900 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G085100 Sobic001G085100 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic006G148200 Sobic006G148200 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300 Sobic001G251200 Sobic001G251200 Sobic007G180600--Sobic001G251200 Sobic004G228800 Sobic004G228800 Sobic007G180600--Sobic004G228800 Sobic007G180600--Sobic006G131000 Sobic008G185500 Sobic008G185500 Sobic007G180600--Sobic008G185500 Sobic007G180600--Sobic001G477700 Sobic001G522100 Sobic001G522100 Sobic007G180600--Sobic001G522100 Sobic004G261600 Sobic004G261600 Sobic007G180600--Sobic004G261600 Sobic007G180600--Sobic007G042900 Sobic004G257200 Sobic004G257200 Sobic007G180600--Sobic004G257200
Octagon: transcription factors


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