Gene annotation
Transcriptome id Sobic.004G261600.1,Sobic.004G261600.3,Sobic.004G261600.2
Synonym Sb04g029980
Functional annotation expressed protein
UniProt A0A194YSS7 , A0A194YRM4
Pfam PF11817
Panther DB PTHR14374
NCBI CDD KOG4386; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65950 : -
RAP-DB (Rice) LOC_Os02g48380.1 : expressed protein
MaizeGDB (Corn) Zm00025a009182 , Zm00025a009181 , Zm00025a032519 , Zm00025a007875 , Zm00025a007876 , Zm00025a021804
Brachypodium KQK01011
Barley HORVU6Hr1G070330.11 , HORVU6Hr1G070330.10 , HORVU6Hr1G070330.13 , HORVU6Hr1G070330.12 , HORVU6Hr1G070330.9 , HORVU6Hr1G070330.8
Wheat TraesCS6B02G308100 , TraesCS6D02G259700 , TraesCS6A02G279300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
2 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
3 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
5 Sobic.007G005500 ECT protein, putative, expressed -
6 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
7 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
8 Sobic.004G004300 expressed protein -
9 Sobic.008G099800 expressed protein -
10 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
11 Sobic.001G127200 zinc finger family protein, putative, expressed -
12 Sobic.007G056600 expressed protein -
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.001G281100 START domain containing protein, expressed -
15 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
16 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
17 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
18 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
19 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
20 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D


Gene co-expression network
sample Sobic004G261600 Sobic004G261600 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G236200 Sobic004G236200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic006G126100--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic006G126100--Sobic008G004600 Sobic004G039600 Sobic004G039600 Sobic006G126100--Sobic004G039600 Sobic001G534800 Sobic001G534800 Sobic006G126100--Sobic001G534800 Sobic006G126100--Sobic003G104000 Sobic006G012500 Sobic006G012500 Sobic006G126100--Sobic006G012500 Sobic004G135400 Sobic004G135400 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500 Sobic003G209200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic003G209200--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic003G209200--Sobic006G077300 Sobic006G021700 Sobic006G021700 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic003G337300 Sobic003G337300 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic001G251200--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic001G251200--Sobic001G281100 Sobic002G137400 Sobic002G137400 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic004G002100 Sobic004G002100 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic004G113400 Sobic004G113400 Sobic008G099800--Sobic004G113400 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000
Octagon: transcription factors


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