Gene annotation
Transcriptome id Sobic.009G013000.1,Sobic.009G013000.3,Sobic.009G013000.2
Synonym
Functional annotation rp3 protein, putative, expressed
UniProt B3VTC1 , B2LTJ1 , C5YYI5
Pfam PF05729
Panther DB PTHR23155 PTHR23155:SF455
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g23990.1 : rp3 protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G146300 AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed -
2 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
3 Sobic.009G013100 rp3 protein, putative, expressed -
4 Sobic.008G007000 HIT zinc finger domain containing protein, expressed K11663: ZNHIT1, zinc finger HIT domain-containing protein 1
5 Sobic.003G027800 protein kinase family protein, putative, expressed -
6 Sobic.009G031500 agenet domain containing protein, putative, expressed -
7 Sobic.001G463800 expressed protein -
8 Sobic.002G370400 expressed protein -
9 Sobic.010G250800 DNA binding protein, putative, expressed -
10 Sobic.003G077500 expressed protein -
11 Sobic.003G006900 microtubule associated protein, putative, expressed -
12 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
13 Sobic.002G427300 protein phosphotase protein, putative, expressed -
14 Sobic.010G015000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.002G184400 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
17 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
18 Sobic.005G112566 - -
19 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
20 Sobic.002G107532 - -


Gene co-expression network
sample Sobic009G013000 Sobic009G013000 Sobic004G146300 Sobic004G146300 Sobic009G013000--Sobic004G146300 Sobic004G206300 Sobic004G206300 Sobic009G013000--Sobic004G206300 Sobic009G013100 Sobic009G013100 Sobic009G013000--Sobic009G013100 Sobic008G007000 Sobic008G007000 Sobic009G013000--Sobic008G007000 Sobic003G027800 Sobic003G027800 Sobic009G013000--Sobic003G027800 Sobic009G031500 Sobic009G031500 Sobic009G013000--Sobic009G031500 Sobic001G463800 Sobic001G463800 Sobic009G013000--Sobic001G463800 Sobic002G370400 Sobic002G370400 Sobic009G013000--Sobic002G370400 Sobic010G250800 Sobic010G250800 Sobic009G013000--Sobic010G250800 Sobic009G073400 Sobic009G073400 Sobic004G146300--Sobic009G073400 Sobic004G146300--Sobic010G250800 Sobic009G001200 Sobic009G001200 Sobic004G146300--Sobic009G001200 Sobic010G252700 Sobic010G252700 Sobic004G146300--Sobic010G252700 Sobic001G122100 Sobic001G122100 Sobic004G146300--Sobic001G122100 Sobic001G442700 Sobic001G442700 Sobic004G146300--Sobic001G442700 Sobic003G345200 Sobic003G345200 Sobic004G146300--Sobic003G345200 Sobic004G146300--Sobic009G013000 Sobic009G167100 Sobic009G167100 Sobic004G146300--Sobic009G167100 Sobic004G212700 Sobic004G212700 Sobic004G206300--Sobic004G212700 Sobic004G027000 Sobic004G027000 Sobic004G206300--Sobic004G027000 Sobic009G056300 Sobic009G056300 Sobic004G206300--Sobic009G056300 Sobic004G129600 Sobic004G129600 Sobic004G206300--Sobic004G129600 Sobic004G206300--Sobic009G031500 Sobic008G125000 Sobic008G125000 Sobic004G206300--Sobic008G125000 Sobic004G225300 Sobic004G225300 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic001G099800 Sobic001G099800 Sobic004G206300--Sobic001G099800 Sobic002G316500 Sobic002G316500 Sobic009G013100--Sobic002G316500 Sobic005G099150 Sobic005G099150 Sobic009G013100--Sobic005G099150 Sobic010G139301 Sobic010G139301 Sobic009G013100--Sobic010G139301 Sobic008G000800 Sobic008G000800 Sobic009G013100--Sobic008G000800 Sobic002G182300 Sobic002G182300 Sobic009G013100--Sobic002G182300 Sobic010G229000 Sobic010G229000 Sobic009G013100--Sobic010G229000 Sobic006G068400 Sobic006G068400 Sobic009G013100--Sobic006G068400 Sobic004G227500 Sobic004G227500 Sobic009G013100--Sobic004G227500 Sobic003G323900 Sobic003G323900 Sobic009G013100--Sobic003G323900 Sobic001G487200 Sobic001G487200 Sobic008G007000--Sobic001G487200 Sobic008G007000--Sobic009G031500 Sobic008G007000--Sobic002G370400 Sobic004G315700 Sobic004G315700 Sobic008G007000--Sobic004G315700 Sobic009G253400 Sobic009G253400 Sobic008G007000--Sobic009G253400 Sobic008G007000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic008G007000--Sobic001G051300 Sobic006G084300 Sobic006G084300 Sobic008G007000--Sobic006G084300 Sobic007G219200 Sobic007G219200 Sobic008G007000--Sobic007G219200 Sobic002G219900 Sobic002G219900 Sobic003G027800--Sobic002G219900 Sobic008G169400 Sobic008G169400 Sobic003G027800--Sobic008G169400 Sobic007G128100 Sobic007G128100 Sobic003G027800--Sobic007G128100 Sobic008G038200 Sobic008G038200 Sobic003G027800--Sobic008G038200 Sobic005G032600 Sobic005G032600 Sobic003G027800--Sobic005G032600 Sobic003G027800--Sobic009G167100 Sobic003G027800--Sobic009G031500 Sobic001G113800 Sobic001G113800 Sobic003G027800--Sobic001G113800 Sobic006G179300 Sobic006G179300 Sobic003G027800--Sobic006G179300 Sobic004G207000 Sobic004G207000 Sobic009G031500--Sobic004G207000 Sobic001G540700 Sobic001G540700 Sobic009G031500--Sobic001G540700 Sobic006G126600 Sobic006G126600 Sobic009G031500--Sobic006G126600 Sobic007G125700 Sobic007G125700 Sobic009G031500--Sobic007G125700 Sobic009G031500--Sobic001G487200 Sobic003G274400 Sobic003G274400 Sobic009G031500--Sobic003G274400 Sobic003G077500 Sobic003G077500 Sobic009G031500--Sobic003G077500 Sobic009G031500--Sobic004G206300 Sobic009G031500--Sobic003G027800 Sobic001G463800--Sobic002G370400 Sobic001G285200 Sobic001G285200 Sobic001G463800--Sobic001G285200 Sobic005G055600 Sobic005G055600 Sobic001G463800--Sobic005G055600 Sobic004G308100 Sobic004G308100 Sobic001G463800--Sobic004G308100 Sobic001G463800--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic001G463800--Sobic009G212100 Sobic001G201000 Sobic001G201000 Sobic001G463800--Sobic001G201000 Sobic006G267500 Sobic006G267500 Sobic001G463800--Sobic006G267500 Sobic008G096200 Sobic008G096200 Sobic001G463800--Sobic008G096200 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic002G370400--Sobic004G315700 Sobic006G272500 Sobic006G272500 Sobic002G370400--Sobic006G272500 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic010G211800 Sobic010G211800 Sobic002G370400--Sobic010G211800 Sobic009G052100 Sobic009G052100 Sobic010G250800--Sobic009G052100 Sobic007G006800 Sobic007G006800 Sobic010G250800--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic010G250800--Sobic006G071628 Sobic001G408300 Sobic001G408300 Sobic010G250800--Sobic001G408300 Sobic001G385400 Sobic001G385400 Sobic010G250800--Sobic001G385400 Sobic010G250800--Sobic009G167100 Sobic005G088900 Sobic005G088900 Sobic010G250800--Sobic005G088900 Sobic009G049200 Sobic009G049200 Sobic010G250800--Sobic009G049200 Sobic004G038100 Sobic004G038100 Sobic010G250800--Sobic004G038100
Octagon: transcription factors


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