Gene annotation
Transcriptome id Sobic.008G125000.1
Synonym delta-ADR, Sb08g017720
Functional annotation AP-3 complex subunit delta, putative, expressed
UniProt C5YPL0
Pfam PF01602
Panther DB PTHR22781
NCBI CDD KOG1059; Vesicle coat complex AP-3, delta subunit
KEGG Orthology K12396; AP-3 complex subunit delta
Gene Ontology GO:0016192; vesicle-mediated transport GO:0006886intracellular protein transport


Orthologs (automatic annotation)
TAIR AT1G48760 : delta-adaptin
RAP-DB (Rice) LOC_Os01g32880.1 : AP-3 complex subunit delta, putative, expressed
MaizeGDB (Corn) Zm00025a054313 , Zm00025a025490
Brachypodium KQK04486
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G056300 PHD finger protein, putative, expressed -
2 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
3 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
4 Sobic.003G307900 BSD domain containing protein, expressed -
5 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
6 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
7 Sobic.007G010900 esterase, putative, expressed -
8 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
9 Sobic.004G358900 Sec1 family transport protein, putative, expressed -
10 Sobic.004G184000 SFT2, putative, expressed -
11 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
12 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
13 Sobic.001G008500 metallo-beta-lactamase, putative, expressed K14403: CPSF3, cleavage and polyadenylation specificity factor subunit 3
14 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
15 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
16 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
17 Sobic.009G060400 proline-rich family protein, putative, expressed -
18 Sobic.003G253400 expressed protein -
19 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
20 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1


Gene co-expression network
sample Sobic008G125000 Sobic008G125000 Sobic009G056300 Sobic009G056300 Sobic008G125000--Sobic009G056300 Sobic001G115500 Sobic001G115500 Sobic008G125000--Sobic001G115500 Sobic006G245700 Sobic006G245700 Sobic008G125000--Sobic006G245700 Sobic003G307900 Sobic003G307900 Sobic008G125000--Sobic003G307900 Sobic004G075200 Sobic004G075200 Sobic008G125000--Sobic004G075200 Sobic009G120500 Sobic009G120500 Sobic008G125000--Sobic009G120500 Sobic007G010900 Sobic007G010900 Sobic008G125000--Sobic007G010900 Sobic006G041100 Sobic006G041100 Sobic008G125000--Sobic006G041100 Sobic004G358900 Sobic004G358900 Sobic008G125000--Sobic004G358900 Sobic009G056300--Sobic008G125000 Sobic004G206300 Sobic004G206300 Sobic009G056300--Sobic004G206300 Sobic002G224700 Sobic002G224700 Sobic009G056300--Sobic002G224700 Sobic009G194300 Sobic009G194300 Sobic009G056300--Sobic009G194300 Sobic001G041200 Sobic001G041200 Sobic009G056300--Sobic001G041200 Sobic001G080000 Sobic001G080000 Sobic009G056300--Sobic001G080000 Sobic004G027000 Sobic004G027000 Sobic009G056300--Sobic004G027000 Sobic002G394800 Sobic002G394800 Sobic009G056300--Sobic002G394800 Sobic001G152000 Sobic001G152000 Sobic009G056300--Sobic001G152000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic004G256300 Sobic004G256300 Sobic006G245700--Sobic004G256300 Sobic001G370300 Sobic001G370300 Sobic006G245700--Sobic001G370300 Sobic006G245700--Sobic008G125000 Sobic003G274400 Sobic003G274400 Sobic006G245700--Sobic003G274400 Sobic006G245700--Sobic001G115500 Sobic006G245700--Sobic002G394800 Sobic006G245700--Sobic001G436300 Sobic003G221500 Sobic003G221500 Sobic006G245700--Sobic003G221500 Sobic001G157600 Sobic001G157600 Sobic006G245700--Sobic001G157600 Sobic003G083900 Sobic003G083900 Sobic003G307900--Sobic003G083900 Sobic003G307900--Sobic008G125000 Sobic004G133700 Sobic004G133700 Sobic003G307900--Sobic004G133700 Sobic003G307900--Sobic001G370300 Sobic006G087100 Sobic006G087100 Sobic003G307900--Sobic006G087100 Sobic004G057800 Sobic004G057800 Sobic003G307900--Sobic004G057800 Sobic001G285300 Sobic001G285300 Sobic003G307900--Sobic001G285300 Sobic005G187500 Sobic005G187500 Sobic003G307900--Sobic005G187500 Sobic003G307900--Sobic007G010900 Sobic009G207200 Sobic009G207200 Sobic004G075200--Sobic009G207200 Sobic001G469200 Sobic001G469200 Sobic004G075200--Sobic001G469200 Sobic004G075200--Sobic008G125000 Sobic001G467100 Sobic001G467100 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic006G029400 Sobic006G029400 Sobic004G075200--Sobic006G029400 Sobic004G075200--Sobic004G256300 Sobic004G075200--Sobic003G008600 Sobic004G075200--Sobic006G245700 Sobic001G117800 Sobic001G117800 Sobic009G120500--Sobic001G117800 Sobic003G240700 Sobic003G240700 Sobic009G120500--Sobic003G240700 Sobic003G314700 Sobic003G314700 Sobic009G120500--Sobic003G314700 Sobic001G474400 Sobic001G474400 Sobic009G120500--Sobic001G474400 Sobic006G265600 Sobic006G265600 Sobic009G120500--Sobic006G265600 Sobic003G029600 Sobic003G029600 Sobic009G120500--Sobic003G029600 Sobic009G120500--Sobic004G358900 Sobic005G059500 Sobic005G059500 Sobic009G120500--Sobic005G059500 Sobic001G449900 Sobic001G449900 Sobic009G120500--Sobic001G449900 Sobic009G105900 Sobic009G105900 Sobic007G010900--Sobic009G105900 Sobic007G010900--Sobic008G125000 Sobic007G010900--Sobic003G307900 Sobic004G047200 Sobic004G047200 Sobic007G010900--Sobic004G047200 Sobic007G010900--Sobic001G373000 Sobic006G056200 Sobic006G056200 Sobic007G010900--Sobic006G056200 Sobic008G013300 Sobic008G013300 Sobic007G010900--Sobic008G013300 Sobic002G318600 Sobic002G318600 Sobic007G010900--Sobic002G318600 Sobic006G233300 Sobic006G233300 Sobic007G010900--Sobic006G233300 Sobic002G423500 Sobic002G423500 Sobic006G041100--Sobic002G423500 Sobic006G041100--Sobic006G265600 Sobic001G522000 Sobic001G522000 Sobic006G041100--Sobic001G522000 Sobic002G402500 Sobic002G402500 Sobic006G041100--Sobic002G402500 Sobic006G041100--Sobic009G120500 Sobic005G163700 Sobic005G163700 Sobic006G041100--Sobic005G163700 Sobic006G041100--Sobic004G047200 Sobic006G041100--Sobic001G008500 Sobic001G530800 Sobic001G530800 Sobic006G041100--Sobic001G530800 Sobic004G358900--Sobic009G120500 Sobic003G005900 Sobic003G005900 Sobic004G358900--Sobic003G005900 Sobic004G358900--Sobic008G125000 Sobic003G348200 Sobic003G348200 Sobic004G358900--Sobic003G348200 Sobic003G062400 Sobic003G062400 Sobic004G358900--Sobic003G062400 Sobic004G277400 Sobic004G277400 Sobic004G358900--Sobic004G277400 Sobic001G205900 Sobic001G205900 Sobic004G358900--Sobic001G205900 Sobic004G358900--Sobic006G265600 Sobic002G223800 Sobic002G223800 Sobic004G358900--Sobic002G223800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.