Gene annotation
Transcriptome id Sobic.002G427300.1
Synonym Sb02g043760
Functional annotation protein phosphotase protein, putative, expressed
UniProt C5X6D9
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF284
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G09160 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os07g49040.1 : protein phosphotase protein, putative, expressed
MaizeGDB (Corn) Zm00025a051859 , Zm00025a052606 , Zm00025a015498 , Zm00025a049239
Brachypodium KQK14517 , KQK22047 , KQK14516 , KQK14514 , PNT74534 , PNT74533
Barley HORVU2Hr1G015470.3 , HORVU2Hr1G015470.2 , HORVU2Hr1G015470.1 , HORVU2Hr1G015470.5 , HORVU2Hr1G015470.4 , HORVU4Hr1G054610.3 , HORVU4Hr1G054610.4 , HORVU4Hr1G054610.2 , HORVU4Hr1G054610.1 , HORVU2Hr1G015480.2 , HORVU2Hr1G015480.1 , HORVU5Hr1G067020.2
Wheat TraesCS2A02G093700 , TraesCS4A02G117600 , TraesCS4A02G117600 , TraesCS2D02G092500 , TraesCS2B02G108200 , TraesCS2A02G093700 , TraesCS2A02G093700 , TraesCS2A02G093700 , TraesCS4B02G186800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
2 Sobic.001G119800 expressed protein -
3 Sobic.006G281000 methyltransferase, putative, expressed -
4 Sobic.006G140600 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
5 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
6 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.003G314700 expressed protein -
8 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
9 Sobic.001G036800 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
10 Sobic.003G275000 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
11 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
12 Sobic.002G162000 - -
13 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
14 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
15 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
16 Sobic.006G156300 WD-40 repeat family protein, putative, expressed -
17 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
18 Sobic.001G078100 expressed protein -
19 Sobic.010G236600 oligopeptidase, putative, expressed K01410: mitochondrial intermediate peptidase
20 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase


Gene co-expression network
sample Sobic002G427300 Sobic002G427300 Sobic006G208400 Sobic006G208400 Sobic002G427300--Sobic006G208400 Sobic001G119800 Sobic001G119800 Sobic002G427300--Sobic001G119800 Sobic006G281000 Sobic006G281000 Sobic002G427300--Sobic006G281000 Sobic006G140600 Sobic006G140600 Sobic002G427300--Sobic006G140600 Sobic010G085200 Sobic010G085200 Sobic002G427300--Sobic010G085200 Sobic004G006700 Sobic004G006700 Sobic002G427300--Sobic004G006700 Sobic003G314700 Sobic003G314700 Sobic002G427300--Sobic003G314700 Sobic001G460500 Sobic001G460500 Sobic002G427300--Sobic001G460500 Sobic001G036800 Sobic001G036800 Sobic002G427300--Sobic001G036800 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic006G208400--Sobic002G427300 Sobic006G208400--Sobic003G314700 Sobic008G015200 Sobic008G015200 Sobic001G119800--Sobic008G015200 Sobic001G119800--Sobic002G427300 Sobic003G389300 Sobic003G389300 Sobic001G119800--Sobic003G389300 Sobic006G112100 Sobic006G112100 Sobic001G119800--Sobic006G112100 Sobic003G435500 Sobic003G435500 Sobic001G119800--Sobic003G435500 Sobic001G119800--Sobic003G314700 Sobic001G119800--Sobic006G281000 Sobic001G385400 Sobic001G385400 Sobic001G119800--Sobic001G385400 Sobic006G156300 Sobic006G156300 Sobic001G119800--Sobic006G156300 Sobic006G281000--Sobic003G314700 Sobic006G281000--Sobic002G427300 Sobic006G281000--Sobic003G389300 Sobic003G275000 Sobic003G275000 Sobic006G281000--Sobic003G275000 Sobic002G327000 Sobic002G327000 Sobic006G281000--Sobic002G327000 Sobic009G105900 Sobic009G105900 Sobic006G281000--Sobic009G105900 Sobic006G281000--Sobic006G208400 Sobic008G135200 Sobic008G135200 Sobic006G281000--Sobic008G135200 Sobic006G281000--Sobic001G119800 Sobic008G088842 Sobic008G088842 Sobic006G140600--Sobic008G088842 Sobic002G143200 Sobic002G143200 Sobic006G140600--Sobic002G143200 Sobic006G140600--Sobic001G385400 Sobic010G138900 Sobic010G138900 Sobic006G140600--Sobic010G138900 Sobic006G140600--Sobic006G208400 Sobic001G315400 Sobic001G315400 Sobic006G140600--Sobic001G315400 Sobic006G140600--Sobic003G435500 Sobic004G178400 Sobic004G178400 Sobic006G140600--Sobic004G178400 Sobic006G033101 Sobic006G033101 Sobic006G140600--Sobic006G033101 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic009G007700 Sobic009G007700 Sobic010G085200--Sobic009G007700 Sobic010G279700 Sobic010G279700 Sobic010G085200--Sobic010G279700 Sobic010G239800 Sobic010G239800 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic010G085200--Sobic003G314700 Sobic003G209400 Sobic003G209400 Sobic010G085200--Sobic003G209400 Sobic004G134100 Sobic004G134100 Sobic004G006700--Sobic004G134100 Sobic010G224900 Sobic010G224900 Sobic004G006700--Sobic010G224900 Sobic001G069800 Sobic001G069800 Sobic004G006700--Sobic001G069800 Sobic001G215500 Sobic001G215500 Sobic004G006700--Sobic001G215500 Sobic009G026200 Sobic009G026200 Sobic004G006700--Sobic009G026200 Sobic004G006700--Sobic002G427300 Sobic004G051300 Sobic004G051300 Sobic004G006700--Sobic004G051300 Sobic009G123500 Sobic009G123500 Sobic004G006700--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic004G006700--Sobic002G393200 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic003G314700--Sobic002G412700 Sobic005G163700 Sobic005G163700 Sobic001G460500--Sobic005G163700 Sobic002G423500 Sobic002G423500 Sobic001G460500--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic001G460500--Sobic002G014400 Sobic004G208500 Sobic004G208500 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic004G047200 Sobic004G047200 Sobic001G460500--Sobic004G047200 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic001G532700 Sobic001G532700 Sobic001G036800--Sobic001G532700 Sobic004G128200 Sobic004G128200 Sobic001G036800--Sobic004G128200 Sobic007G000400 Sobic007G000400 Sobic001G036800--Sobic007G000400 Sobic001G036800--Sobic002G427300 Sobic009G096100 Sobic009G096100 Sobic001G036800--Sobic009G096100 Sobic007G180450 Sobic007G180450 Sobic001G036800--Sobic007G180450 Sobic004G325400 Sobic004G325400 Sobic001G036800--Sobic004G325400 Sobic001G267900 Sobic001G267900 Sobic001G036800--Sobic001G267900 Sobic001G036800--Sobic004G178400
Octagon: transcription factors


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