Gene annotation
Transcriptome id Sobic.010G250800.1,Sobic.010G250800.2
Synonym Sb10g028910
Functional annotation DNA binding protein, putative, expressed
UniProt A0A194YLA4
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G19160 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os06g48700.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a018354 , Zm00025a041783
Brachypodium KQK17387
Barley HORVU7Hr1G097200.3 , HORVU7Hr1G097200.2 , HORVU7Hr1G097200.1 , HORVU7Hr1G097200.5 , HORVU7Hr1G097200.4
Wheat TraesCS7D02G412700 , TraesCS7B02G320800 , TraesCS7B02G320800 , TraesCS7A02G419900 , TraesCS7A02G419900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
2 Sobic.007G006800 pentatricopeptide, putative, expressed -
3 Sobic.006G071628 - -
4 Sobic.001G408300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
6 Sobic.009G167100 TBC domain containing protein, expressed -
7 Sobic.005G088900 AGAP007117-PA, putative, expressed -
8 Sobic.009G049200 Spc97 / Spc98 family protein, putative, expressed K16571: TUBGCP4, gamma-tubulin complex component 4
9 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160
10 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
11 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
12 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
13 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
14 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
15 Sobic.003G420300 zinc finger protein, putative, expressed -
16 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
17 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
18 Sobic.002G152900 OsTOP6B - Topoisomerase 6 subunit B, expressed -
19 Sobic.008G083500 expressed protein -
20 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic010G250800 Sobic010G250800 Sobic009G052100 Sobic009G052100 Sobic010G250800--Sobic009G052100 Sobic007G006800 Sobic007G006800 Sobic010G250800--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic010G250800--Sobic006G071628 Sobic001G408300 Sobic001G408300 Sobic010G250800--Sobic001G408300 Sobic001G385400 Sobic001G385400 Sobic010G250800--Sobic001G385400 Sobic009G167100 Sobic009G167100 Sobic010G250800--Sobic009G167100 Sobic005G088900 Sobic005G088900 Sobic010G250800--Sobic005G088900 Sobic009G049200 Sobic009G049200 Sobic010G250800--Sobic009G049200 Sobic004G038100 Sobic004G038100 Sobic010G250800--Sobic004G038100 Sobic004G315700 Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G052100--Sobic009G049200 Sobic009G052100--Sobic006G071628 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic007G006800--Sobic010G250800 Sobic001G199500 Sobic001G199500 Sobic007G006800--Sobic001G199500 Sobic007G006800--Sobic001G408300 Sobic007G006800--Sobic005G088900 Sobic008G113300 Sobic008G113300 Sobic007G006800--Sobic008G113300 Sobic002G021200 Sobic002G021200 Sobic007G006800--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic007G006800--Sobic006G281900 Sobic003G369200 Sobic003G369200 Sobic007G006800--Sobic003G369200 Sobic002G215200 Sobic002G215200 Sobic007G006800--Sobic002G215200 Sobic006G071628--Sobic009G052100 Sobic001G051300 Sobic001G051300 Sobic006G071628--Sobic001G051300 Sobic006G084300 Sobic006G084300 Sobic006G071628--Sobic006G084300 Sobic007G173000 Sobic007G173000 Sobic006G071628--Sobic007G173000 Sobic006G071628--Sobic010G250800 Sobic006G071628--Sobic001G199500 Sobic006G071628--Sobic004G156200 Sobic006G071628--Sobic001G507200 Sobic001G296800 Sobic001G296800 Sobic006G071628--Sobic001G296800 Sobic001G408300--Sobic007G006800 Sobic001G408300--Sobic010G250800 Sobic010G065800 Sobic010G065800 Sobic001G408300--Sobic010G065800 Sobic010G038800 Sobic010G038800 Sobic001G408300--Sobic010G038800 Sobic001G061800 Sobic001G061800 Sobic001G408300--Sobic001G061800 Sobic006G208400 Sobic006G208400 Sobic001G408300--Sobic006G208400 Sobic001G408300--Sobic005G088900 Sobic009G010300 Sobic009G010300 Sobic001G408300--Sobic009G010300 Sobic001G408300--Sobic010G252700 Sobic001G143600 Sobic001G143600 Sobic001G385400--Sobic001G143600 Sobic002G143200 Sobic002G143200 Sobic001G385400--Sobic002G143200 Sobic003G435500 Sobic003G435500 Sobic001G385400--Sobic003G435500 Sobic008G015200 Sobic008G015200 Sobic001G385400--Sobic008G015200 Sobic001G385400--Sobic010G250800 Sobic001G385400--Sobic001G507200 Sobic002G002100 Sobic002G002100 Sobic001G385400--Sobic002G002100 Sobic001G385400--Sobic009G167100 Sobic006G140600 Sobic006G140600 Sobic001G385400--Sobic006G140600 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic006G257200 Sobic006G257200 Sobic009G167100--Sobic006G257200 Sobic009G167100--Sobic001G385400 Sobic009G167100--Sobic008G015200 Sobic002G320600 Sobic002G320600 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700 Sobic005G088900--Sobic001G199500 Sobic009G191500 Sobic009G191500 Sobic005G088900--Sobic009G191500 Sobic009G176300 Sobic009G176300 Sobic005G088900--Sobic009G176300 Sobic004G215900 Sobic004G215900 Sobic005G088900--Sobic004G215900 Sobic008G068100 Sobic008G068100 Sobic005G088900--Sobic008G068100 Sobic003G432300 Sobic003G432300 Sobic005G088900--Sobic003G432300 Sobic003G144000 Sobic003G144000 Sobic005G088900--Sobic003G144000 Sobic002G133000 Sobic002G133000 Sobic005G088900--Sobic002G133000 Sobic002G003300 Sobic002G003300 Sobic005G088900--Sobic002G003300 Sobic009G049200--Sobic009G052100 Sobic009G049200--Sobic001G507200 Sobic009G049200--Sobic001G143600 Sobic003G250900 Sobic003G250900 Sobic009G049200--Sobic003G250900 Sobic009G049200--Sobic010G250800 Sobic004G231200 Sobic004G231200 Sobic009G049200--Sobic004G231200 Sobic004G307900 Sobic004G307900 Sobic009G049200--Sobic004G307900 Sobic003G423600 Sobic003G423600 Sobic009G049200--Sobic003G423600 Sobic009G049200--Sobic008G015200 Sobic006G033101 Sobic006G033101 Sobic004G038100--Sobic006G033101 Sobic006G181800 Sobic006G181800 Sobic004G038100--Sobic006G181800 Sobic001G373000 Sobic001G373000 Sobic004G038100--Sobic001G373000 Sobic004G038100--Sobic004G215900 Sobic010G188000 Sobic010G188000 Sobic004G038100--Sobic010G188000 Sobic003G259600 Sobic003G259600 Sobic004G038100--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic004G038100--Sobic001G373800 Sobic006G280100 Sobic006G280100 Sobic004G038100--Sobic006G280100 Sobic009G104900 Sobic009G104900 Sobic004G038100--Sobic009G104900
Octagon: transcription factors


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