Gene annotation
Transcriptome id Sobic.008G096800.1,Sobic.008G096800.2
Synonym Z-ISO1.1, Sb08g014610, Z-ISO1.2, Z-ISO
Functional annotation nnrU, putative, expressed
UniProt A0A1B6PCL1 , A0A1B6PCQ8 , A0A097PPY9
Pfam PF07298
Panther DB PTHR35988 PTHR35988:SF2
NCBI CDD -
KEGG Orthology K15744; zeta-carotene isomerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10830 : 15-cis-zeta-carotene isomerase
RAP-DB (Rice) LOC_Os12g21710.1 : nnrU, putative, expressed
MaizeGDB (Corn) Zm00025a054121
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
2 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
3 Sobic.002G321901 - -
4 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
5 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
6 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
7 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
8 Sobic.009G168600 low photochemical bleaching 1 protein, putative, expressed -
9 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
10 Sobic.008G089500 Fe-S metabolism associated domain containing protein, expressed K03517: quinolinate synthase
11 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
12 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
13 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
14 Sobic.001G025400 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
15 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
16 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
17 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
18 Sobic.006G132000 glycine-rich protein, putative, expressed -
19 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.010G140600 bolA, putative, expressed -


Gene co-expression network
sample Sobic008G096800 Sobic008G096800 Sobic003G372900 Sobic003G372900 Sobic008G096800--Sobic003G372900 Sobic005G002900 Sobic005G002900 Sobic008G096800--Sobic005G002900 Sobic002G321901 Sobic002G321901 Sobic008G096800--Sobic002G321901 Sobic001G500600 Sobic001G500600 Sobic008G096800--Sobic001G500600 Sobic003G287900 Sobic003G287900 Sobic008G096800--Sobic003G287900 Sobic001G083100 Sobic001G083100 Sobic008G096800--Sobic001G083100 Sobic003G141100 Sobic003G141100 Sobic008G096800--Sobic003G141100 Sobic009G168600 Sobic009G168600 Sobic008G096800--Sobic009G168600 Sobic003G232700 Sobic003G232700 Sobic008G096800--Sobic003G232700 Sobic003G372900--Sobic001G500600 Sobic001G054100 Sobic001G054100 Sobic003G372900--Sobic001G054100 Sobic003G372900--Sobic001G083100 Sobic002G406700 Sobic002G406700 Sobic003G372900--Sobic002G406700 Sobic003G372900--Sobic003G141100 Sobic003G094350 Sobic003G094350 Sobic003G372900--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic003G372900--Sobic004G336200 Sobic004G333400 Sobic004G333400 Sobic003G372900--Sobic004G333400 Sobic006G280800 Sobic006G280800 Sobic003G372900--Sobic006G280800 Sobic005G002900--Sobic001G083100 Sobic006G055800 Sobic006G055800 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic001G469933 Sobic001G469933 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic002G321901--Sobic008G096800 Sobic003G264800 Sobic003G264800 Sobic002G321901--Sobic003G264800 Sobic004G238200 Sobic004G238200 Sobic002G321901--Sobic004G238200 Sobic006G232600 Sobic006G232600 Sobic002G321901--Sobic006G232600 Sobic010G140600 Sobic010G140600 Sobic002G321901--Sobic010G140600 Sobic002G321901--Sobic001G500600 Sobic002G072400 Sobic002G072400 Sobic002G321901--Sobic002G072400 Sobic004G281900 Sobic004G281900 Sobic002G321901--Sobic004G281900 Sobic006G233700 Sobic006G233700 Sobic002G321901--Sobic006G233700 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G233700 Sobic003G233700 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G287900--Sobic004G353100 Sobic003G287900--Sobic004G336200 Sobic008G074000 Sobic008G074000 Sobic003G287900--Sobic008G074000 Sobic009G170200 Sobic009G170200 Sobic003G287900--Sobic009G170200 Sobic001G083100--Sobic005G002900 Sobic001G083100--Sobic009G148500 Sobic008G039600 Sobic008G039600 Sobic001G083100--Sobic008G039600 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic001G083100--Sobic003G372900 Sobic001G083100--Sobic001G054100 Sobic008G073100 Sobic008G073100 Sobic001G083100--Sobic008G073100 Sobic003G141100--Sobic001G500600 Sobic004G328400 Sobic004G328400 Sobic003G141100--Sobic004G328400 Sobic003G141100--Sobic004G336200 Sobic003G141100--Sobic003G232700 Sobic003G141100--Sobic003G372900 Sobic003G141100--Sobic001G054100 Sobic003G141100--Sobic009G148500 Sobic003G160800 Sobic003G160800 Sobic003G141100--Sobic003G160800 Sobic003G141100--Sobic005G002900 Sobic009G168600--Sobic008G096800 Sobic005G133700 Sobic005G133700 Sobic009G168600--Sobic005G133700 Sobic009G168600--Sobic002G406700 Sobic009G168600--Sobic009G148500 Sobic009G168600--Sobic001G083100 Sobic009G168600--Sobic003G372900 Sobic009G168600--Sobic006G055800 Sobic003G151500 Sobic003G151500 Sobic009G168600--Sobic003G151500 Sobic009G168600--Sobic004G238200 Sobic003G232700--Sobic001G500600 Sobic003G232700--Sobic006G197300 Sobic002G181000 Sobic002G181000 Sobic003G232700--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic003G232700--Sobic002G043600 Sobic001G495200 Sobic001G495200 Sobic003G232700--Sobic001G495200 Sobic003G232700--Sobic003G141100 Sobic003G352500 Sobic003G352500 Sobic003G232700--Sobic003G352500 Sobic003G232700--Sobic004G238200 Sobic003G301300 Sobic003G301300 Sobic003G232700--Sobic003G301300
Octagon: transcription factors


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