Gene annotation
Transcriptome id Sobic.006G237600.1
Synonym Sb06g030440
Functional annotation expressed protein
UniProt C5Y903
Pfam -
Panther DB PTHR33743 PTHR33743:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g55100.1 : expressed protein
MaizeGDB (Corn) Zm00025a057185 , Zm00025a009570
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G244200 expressed protein -
2 Sobic.008G100400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"SMK1(Ortholog in maize:Li et al., 2014)"(PubMedID : 31659912)@tetratricopeptide-like helical, putative, expressed -
3 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
4 Sobic.002G300100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR30 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.010G157700 expressed protein -
6 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
7 Sobic.003G176200 - -
8 Sobic.008G186500 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
9 Sobic.009G241966 - -
10 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
11 Sobic.007G151200 Cupin domain containing protein, expressed -
12 Sobic.008G130700 expressed protein -
13 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
14 Sobic.001G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
15 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
16 Sobic.004G115000 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
18 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
19 Sobic.007G090415 - -
20 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G237600 Sobic006G237600 Sobic004G244200 Sobic004G244200 Sobic006G237600--Sobic004G244200 Sobic008G100400 Sobic008G100400 Sobic006G237600--Sobic008G100400 Sobic007G225700 Sobic007G225700 Sobic006G237600--Sobic007G225700 Sobic002G300100 Sobic002G300100 Sobic006G237600--Sobic002G300100 Sobic010G157700 Sobic010G157700 Sobic006G237600--Sobic010G157700 Sobic001G236800 Sobic001G236800 Sobic006G237600--Sobic001G236800 Sobic003G176200 Sobic003G176200 Sobic006G237600--Sobic003G176200 Sobic008G186500 Sobic008G186500 Sobic006G237600--Sobic008G186500 Sobic009G241966 Sobic009G241966 Sobic006G237600--Sobic009G241966 Sobic005G102800 Sobic005G102800 Sobic004G244200--Sobic005G102800 Sobic004G244200--Sobic006G237600 Sobic004G248700 Sobic004G248700 Sobic004G244200--Sobic004G248700 Sobic005G047900 Sobic005G047900 Sobic004G244200--Sobic005G047900 Sobic009G119800 Sobic009G119800 Sobic004G244200--Sobic009G119800 Sobic009G155900 Sobic009G155900 Sobic004G244200--Sobic009G155900 Sobic003G434300 Sobic003G434300 Sobic004G244200--Sobic003G434300 Sobic004G057700 Sobic004G057700 Sobic004G244200--Sobic004G057700 Sobic008G018100 Sobic008G018100 Sobic004G244200--Sobic008G018100 Sobic007G182600 Sobic007G182600 Sobic008G100400--Sobic007G182600 Sobic001G040600 Sobic001G040600 Sobic008G100400--Sobic001G040600 Sobic003G336500 Sobic003G336500 Sobic008G100400--Sobic003G336500 Sobic008G100400--Sobic010G157700 Sobic008G147400 Sobic008G147400 Sobic008G100400--Sobic008G147400 Sobic009G096100 Sobic009G096100 Sobic008G100400--Sobic009G096100 Sobic001G081300 Sobic001G081300 Sobic008G100400--Sobic001G081300 Sobic010G099300 Sobic010G099300 Sobic008G100400--Sobic010G099300 Sobic009G148200 Sobic009G148200 Sobic008G100400--Sobic009G148200 Sobic002G256800 Sobic002G256800 Sobic007G225700--Sobic002G256800 Sobic002G155100 Sobic002G155100 Sobic007G225700--Sobic002G155100 Sobic007G225700--Sobic005G102800 Sobic010G155600 Sobic010G155600 Sobic007G225700--Sobic010G155600 Sobic006G193500 Sobic006G193500 Sobic007G225700--Sobic006G193500 Sobic003G102700 Sobic003G102700 Sobic007G225700--Sobic003G102700 Sobic003G223000 Sobic003G223000 Sobic007G225700--Sobic003G223000 Sobic006G237000 Sobic006G237000 Sobic007G225700--Sobic006G237000 Sobic007G225700--Sobic008G100400 Sobic001G358900 Sobic001G358900 Sobic002G300100--Sobic001G358900 Sobic002G300100--Sobic006G237600 Sobic007G151200 Sobic007G151200 Sobic002G300100--Sobic007G151200 Sobic006G158500 Sobic006G158500 Sobic002G300100--Sobic006G158500 Sobic005G121500 Sobic005G121500 Sobic002G300100--Sobic005G121500 Sobic007G038432 Sobic007G038432 Sobic002G300100--Sobic007G038432 Sobic007G123200 Sobic007G123200 Sobic002G300100--Sobic007G123200 Sobic002G300100--Sobic004G244200 Sobic001G310166 Sobic001G310166 Sobic002G300100--Sobic001G310166 Sobic010G157700--Sobic009G096100 Sobic010G157700--Sobic001G236800 Sobic010G157700--Sobic008G100400 Sobic010G157700--Sobic008G186500 Sobic010G157700--Sobic007G182600 Sobic002G380100 Sobic002G380100 Sobic010G157700--Sobic002G380100 Sobic007G000400 Sobic007G000400 Sobic010G157700--Sobic007G000400 Sobic003G267000 Sobic003G267000 Sobic010G157700--Sobic003G267000 Sobic001G321400 Sobic001G321400 Sobic010G157700--Sobic001G321400 Sobic004G015700 Sobic004G015700 Sobic001G236800--Sobic004G015700 Sobic002G064400 Sobic002G064400 Sobic001G236800--Sobic002G064400 Sobic001G142400 Sobic001G142400 Sobic001G236800--Sobic001G142400 Sobic001G215300 Sobic001G215300 Sobic001G236800--Sobic001G215300 Sobic007G206100 Sobic007G206100 Sobic001G236800--Sobic007G206100 Sobic008G008500 Sobic008G008500 Sobic001G236800--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic001G236800--Sobic004G151900 Sobic004G246800 Sobic004G246800 Sobic001G236800--Sobic004G246800 Sobic001G236800--Sobic010G157700 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic003G176200--Sobic008G008500 Sobic003G176200--Sobic004G151900 Sobic008G186500--Sobic010G157700 Sobic008G186500--Sobic003G267000 Sobic002G141900 Sobic002G141900 Sobic008G186500--Sobic002G141900 Sobic003G165800 Sobic003G165800 Sobic008G186500--Sobic003G165800 Sobic003G420900 Sobic003G420900 Sobic008G186500--Sobic003G420900 Sobic008G186500--Sobic004G015700 Sobic008G088842 Sobic008G088842 Sobic008G186500--Sobic008G088842 Sobic010G134500 Sobic010G134500 Sobic008G186500--Sobic010G134500 Sobic008G186500--Sobic001G321400 Sobic009G241966--Sobic004G057700 Sobic006G197500 Sobic006G197500 Sobic009G241966--Sobic006G197500 Sobic009G000600 Sobic009G000600 Sobic009G241966--Sobic009G000600 Sobic008G056350 Sobic008G056350 Sobic009G241966--Sobic008G056350 Sobic004G197000 Sobic004G197000 Sobic009G241966--Sobic004G197000 Sobic001G268700 Sobic001G268700 Sobic009G241966--Sobic001G268700 Sobic009G241966--Sobic004G248700 Sobic006G240900 Sobic006G240900 Sobic009G241966--Sobic006G240900 Sobic002G050500 Sobic002G050500 Sobic009G241966--Sobic002G050500
Octagon: transcription factors


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