Gene annotation
Transcriptome id Sobic.006G091850.1
Synonym -
Functional annotation -
UniProt A0A1Z5RD58
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G49610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35070.1 : OsFBX239 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016062 , Zm00025a016059 , Zm00025a015925
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G170700 START domain containing protein, putative, expressed -
2 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
3 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
4 Sobic.004G207100 expressed protein -
5 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.001G154200 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.001G425200 expressed protein -
8 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
9 Sobic.009G060400 proline-rich family protein, putative, expressed -
10 Sobic.006G272300 pentatricopeptide, putative, expressed -
11 Sobic.002G354800 zinc finger family protein, putative, expressed -
12 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
13 Sobic.010G038900 expressed protein -
14 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
15 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
16 Sobic.004G340100 PB1 domain containing protein, expressed -
17 Sobic.010G193700 expressed protein -
18 Sobic.007G036800 xylosyltransferase, putative, expressed -
19 Sobic.006G100266 - -
20 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic006G091850 Sobic006G091850 Sobic006G170700 Sobic006G170700 Sobic006G091850--Sobic006G170700 Sobic005G160200 Sobic005G160200 Sobic006G091850--Sobic005G160200 Sobic002G315100 Sobic002G315100 Sobic006G091850--Sobic002G315100 Sobic004G207100 Sobic004G207100 Sobic006G091850--Sobic004G207100 Sobic003G415100 Sobic003G415100 Sobic006G091850--Sobic003G415100 Sobic001G154200 Sobic001G154200 Sobic006G091850--Sobic001G154200 Sobic001G425200 Sobic001G425200 Sobic006G091850--Sobic001G425200 Sobic006G184200 Sobic006G184200 Sobic006G091850--Sobic006G184200 Sobic009G060400 Sobic009G060400 Sobic006G091850--Sobic009G060400 Sobic006G170700--Sobic006G091850 Sobic006G170700--Sobic001G154200 Sobic006G170700--Sobic006G184200 Sobic006G170700--Sobic004G207100 Sobic005G198200 Sobic005G198200 Sobic006G170700--Sobic005G198200 Sobic006G170700--Sobic003G415100 Sobic006G100266 Sobic006G100266 Sobic006G170700--Sobic006G100266 Sobic009G059400 Sobic009G059400 Sobic006G170700--Sobic009G059400 Sobic006G170700--Sobic002G315100 Sobic004G014100 Sobic004G014100 Sobic005G160200--Sobic004G014100 Sobic003G411700 Sobic003G411700 Sobic005G160200--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic005G160200--Sobic003G343200 Sobic005G160200--Sobic006G091850 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic010G257500 Sobic010G257500 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200 Sobic002G354800 Sobic002G354800 Sobic002G315100--Sobic002G354800 Sobic002G315100--Sobic006G091850 Sobic002G315100--Sobic005G160200 Sobic003G055200 Sobic003G055200 Sobic002G315100--Sobic003G055200 Sobic002G230400 Sobic002G230400 Sobic002G315100--Sobic002G230400 Sobic002G315100--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G315100--Sobic006G143300 Sobic009G069200 Sobic009G069200 Sobic002G315100--Sobic009G069200 Sobic002G315100--Sobic006G184200 Sobic004G207100--Sobic006G091850 Sobic004G207100--Sobic006G170700 Sobic008G087200 Sobic008G087200 Sobic004G207100--Sobic008G087200 Sobic004G207100--Sobic009G059400 Sobic003G431200 Sobic003G431200 Sobic004G207100--Sobic003G431200 Sobic001G306800 Sobic001G306800 Sobic004G207100--Sobic001G306800 Sobic002G274700 Sobic002G274700 Sobic004G207100--Sobic002G274700 Sobic003G255700 Sobic003G255700 Sobic004G207100--Sobic003G255700 Sobic004G207100--Sobic006G100266 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic001G196800 Sobic001G196800 Sobic001G154200--Sobic001G196800 Sobic010G018900 Sobic010G018900 Sobic001G154200--Sobic010G018900 Sobic006G272300 Sobic006G272300 Sobic001G154200--Sobic006G272300 Sobic001G154200--Sobic006G170700 Sobic001G154200--Sobic010G038900 Sobic001G154200--Sobic008G087200 Sobic001G154200--Sobic006G091850 Sobic002G241100 Sobic002G241100 Sobic001G154200--Sobic002G241100 Sobic001G154200--Sobic005G160200 Sobic001G425200--Sobic003G411700 Sobic004G041100 Sobic004G041100 Sobic001G425200--Sobic004G041100 Sobic010G103500 Sobic010G103500 Sobic001G425200--Sobic010G103500 Sobic001G212600 Sobic001G212600 Sobic001G425200--Sobic001G212600 Sobic002G271400 Sobic002G271400 Sobic001G425200--Sobic002G271400 Sobic004G306100 Sobic004G306100 Sobic001G425200--Sobic004G306100 Sobic003G336900 Sobic003G336900 Sobic001G425200--Sobic003G336900 Sobic001G425200--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic001G425200--Sobic003G298900 Sobic008G160600 Sobic008G160600 Sobic006G184200--Sobic008G160600 Sobic006G184200--Sobic010G038900 Sobic006G184200--Sobic002G354800 Sobic008G174500 Sobic008G174500 Sobic006G184200--Sobic008G174500 Sobic003G042200 Sobic003G042200 Sobic006G184200--Sobic003G042200 Sobic006G184200--Sobic002G230400 Sobic006G184200--Sobic008G087200 Sobic010G009600 Sobic010G009600 Sobic006G184200--Sobic010G009600 Sobic003G379900 Sobic003G379900 Sobic006G184200--Sobic003G379900 Sobic006G245700 Sobic006G245700 Sobic009G060400--Sobic006G245700 Sobic007G036800 Sobic007G036800 Sobic009G060400--Sobic007G036800 Sobic010G256200 Sobic010G256200 Sobic009G060400--Sobic010G256200 Sobic009G060400--Sobic001G346700 Sobic009G060400--Sobic001G425200 Sobic003G304800 Sobic003G304800 Sobic009G060400--Sobic003G304800 Sobic001G115500 Sobic001G115500 Sobic009G060400--Sobic001G115500 Sobic009G060400--Sobic006G091850 Sobic008G125000 Sobic008G125000 Sobic009G060400--Sobic008G125000
Octagon: transcription factors


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