Gene annotation
Transcriptome id Sobic.003G367300.1
Synonym Sb03g040880, ACT7
Functional annotation actin, putative, expressed
UniProt C5XQM4
Pfam PF00022
Panther DB PTHR11937 PTHR11937:SF205
NCBI CDD -
KEGG Orthology K10355; actin, other eukaryote
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09810 : actin 7
RAP-DB (Rice) LOC_Os01g64630.4 : actin, putative, expressed
MaizeGDB (Corn) Zm00025a040979 , Zm00025a052678 , Zm00025a008940 , Zm00025a006468 , Zm00025a039570 , Zm00025a016937 , Zm00025a012921 , Zm00025a007893 , Zm00025a004239 , Zm00025a034168 , Zm00025a026721 , Zm00025a037260
Brachypodium PNT73248 , KQK13511 , KQK06042 , KQK06041 , KQJ85561 , KQK10759 , KQJ92134 , KQK08099
Barley HORVU3Hr1G083380.3 , HORVU3Hr1G083380.2 , HORVU3Hr1G083380.1 , HORVU3Hr1G083380.6 , HORVU3Hr1G083380.5 , HORVU3Hr1G083380.4 , HORVU1Hr1G074350.1 , HORVU1Hr1G074350.2 , HORVU4Hr1G008310.6 , HORVU4Hr1G008310.8 , HORVU4Hr1G008310.9 , HORVU4Hr1G008310.7 , HORVU4Hr1G008310.4 , HORVU4Hr1G008310.5 , HORVU4Hr1G008310.2 , HORVU4Hr1G008310.3 , HORVU4Hr1G008310.1
Wheat TraesCS3B02G410000 , TraesCS3B02G410000 , TraesCS5A02G000400 , TraesCS1B02G283900 , TraesCS3A02G377300 , TraesCS4A02G356100 , TraesCS1A02G274400 , TraesCS5D02G000400 , TraesCS4A02G356100 , TraesCS5D02G516200 , TraesCS1D02G274400 , TraesCS3D02G370400 , TraesCS3D02G370400 , TraesCS3D02G370400 , TraesCS5B02G516100
Populus PNT31612


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
2 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
3 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
4 Sobic.007G006600 expressed protein -
5 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
6 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
7 Sobic.001G436000 expressed protein -
8 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
9 Sobic.001G162100 WRKY94, expressed -
10 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
11 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
12 Sobic.003G272400 DUF292 domain containing protein, expressed -
13 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
14 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
15 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
17 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
18 Sobic.004G350300 No apical meristem protein, putative, expressed -
19 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
20 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic003G367300 Sobic003G367300 Sobic002G293300 Sobic002G293300 Sobic003G367300--Sobic002G293300 Sobic001G516100 Sobic001G516100 Sobic003G367300--Sobic001G516100 Sobic001G434900 Sobic001G434900 Sobic003G367300--Sobic001G434900 Sobic007G006600 Sobic007G006600 Sobic003G367300--Sobic007G006600 Sobic004G271700 Sobic004G271700 Sobic003G367300--Sobic004G271700 Sobic009G079300 Sobic009G079300 Sobic003G367300--Sobic009G079300 Sobic001G436000 Sobic001G436000 Sobic003G367300--Sobic001G436000 Sobic003G002400 Sobic003G002400 Sobic003G367300--Sobic003G002400 Sobic001G162100 Sobic001G162100 Sobic003G367300--Sobic001G162100 Sobic002G293300--Sobic003G367300 Sobic002G293300--Sobic001G436000 Sobic002G379400 Sobic002G379400 Sobic002G293300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G293300--Sobic010G052800 Sobic009G231200 Sobic009G231200 Sobic002G293300--Sobic009G231200 Sobic002G330300 Sobic002G330300 Sobic002G293300--Sobic002G330300 Sobic001G082900 Sobic001G082900 Sobic002G293300--Sobic001G082900 Sobic004G025000 Sobic004G025000 Sobic002G293300--Sobic004G025000 Sobic002G293300--Sobic001G516100 Sobic004G031600 Sobic004G031600 Sobic001G516100--Sobic004G031600 Sobic001G103200 Sobic001G103200 Sobic001G516100--Sobic001G103200 Sobic001G516100--Sobic003G367300 Sobic001G516100--Sobic004G271700 Sobic001G516100--Sobic002G330300 Sobic001G516100--Sobic002G293300 Sobic001G541100 Sobic001G541100 Sobic001G516100--Sobic001G541100 Sobic001G516100--Sobic003G002400 Sobic004G274400 Sobic004G274400 Sobic001G516100--Sobic004G274400 Sobic002G122700 Sobic002G122700 Sobic001G434900--Sobic002G122700 Sobic004G350300 Sobic004G350300 Sobic001G434900--Sobic004G350300 Sobic001G434900--Sobic003G002400 Sobic001G434900--Sobic003G367300 Sobic006G225600 Sobic006G225600 Sobic001G434900--Sobic006G225600 Sobic005G176000 Sobic005G176000 Sobic001G434900--Sobic005G176000 Sobic003G248600 Sobic003G248600 Sobic001G434900--Sobic003G248600 Sobic001G434900--Sobic001G162100 Sobic001G434900--Sobic004G274400 Sobic007G006600--Sobic003G367300 Sobic002G118600 Sobic002G118600 Sobic007G006600--Sobic002G118600 Sobic001G450700 Sobic001G450700 Sobic007G006600--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic007G006600--Sobic007G169200 Sobic007G006600--Sobic002G293300 Sobic007G006600--Sobic002G330300 Sobic010G094600 Sobic010G094600 Sobic007G006600--Sobic010G094600 Sobic007G188100 Sobic007G188100 Sobic007G006600--Sobic007G188100 Sobic001G147200 Sobic001G147200 Sobic007G006600--Sobic001G147200 Sobic008G115500 Sobic008G115500 Sobic004G271700--Sobic008G115500 Sobic004G271700--Sobic001G516100 Sobic004G271700--Sobic003G002400 Sobic009G219900 Sobic009G219900 Sobic004G271700--Sobic009G219900 Sobic001G158500 Sobic001G158500 Sobic004G271700--Sobic001G158500 Sobic004G271700--Sobic001G103200 Sobic010G188100 Sobic010G188100 Sobic004G271700--Sobic010G188100 Sobic001G220400 Sobic001G220400 Sobic004G271700--Sobic001G220400 Sobic004G271700--Sobic002G293300 Sobic009G000200 Sobic009G000200 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic003G126300 Sobic003G126300 Sobic009G079300--Sobic003G126300 Sobic003G316300 Sobic003G316300 Sobic009G079300--Sobic003G316300 Sobic007G025800 Sobic007G025800 Sobic009G079300--Sobic007G025800 Sobic001G180900 Sobic001G180900 Sobic009G079300--Sobic001G180900 Sobic003G272400 Sobic003G272400 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic009G079300--Sobic003G367300 Sobic001G436000--Sobic002G379400 Sobic001G436000--Sobic002G293300 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G081600 Sobic001G081600 Sobic001G436000--Sobic001G081600 Sobic001G436000--Sobic002G330300 Sobic001G436000--Sobic003G367300 Sobic006G205200 Sobic006G205200 Sobic001G436000--Sobic006G205200 Sobic002G344700 Sobic002G344700 Sobic001G436000--Sobic002G344700 Sobic003G002400--Sobic004G350300 Sobic003G002400--Sobic004G274400 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic003G002400--Sobic004G271700 Sobic001G122500 Sobic001G122500 Sobic003G002400--Sobic001G122500 Sobic006G033200 Sobic006G033200 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic001G162100--Sobic002G122700 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic001G162100--Sobic009G219900
Octagon: transcription factors


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