Gene annotation
Transcriptome id Sobic.003G236300.1
Synonym Sb03g029370
Functional annotation tat pathway signal sequence family protein, expressed
UniProt C5XF50
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01400 : -
RAP-DB (Rice) LOC_Os01g45640.1 : tat pathway signal sequence family protein, expressed
MaizeGDB (Corn) Zm00025a028263
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G236300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G124100 - -
2 Sobic.006G281066 - -
3 Sobic.008G130700 expressed protein -
4 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
5 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
6 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
8 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
9 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
10 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
11 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
12 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.005G218201 - -
14 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.006G025700 - -
16 Sobic.007G090415 - -
17 Sobic.004G253800 - -
18 Sobic.001G445200 expressed protein -
19 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
20 Sobic.001G142400 RIO1 family protein, expressed -


Gene co-expression network
sample Sobic003G236300 Sobic003G236300 Sobic002G124100 Sobic002G124100 Sobic003G236300--Sobic002G124100 Sobic006G281066 Sobic006G281066 Sobic003G236300--Sobic006G281066 Sobic008G130700 Sobic008G130700 Sobic003G236300--Sobic008G130700 Sobic001G543700 Sobic001G543700 Sobic003G236300--Sobic001G543700 Sobic006G263800 Sobic006G263800 Sobic003G236300--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic003G236300--Sobic002G190100 Sobic005G141000 Sobic005G141000 Sobic003G236300--Sobic005G141000 Sobic009G001500 Sobic009G001500 Sobic003G236300--Sobic009G001500 Sobic004G109000 Sobic004G109000 Sobic003G236300--Sobic004G109000 Sobic002G124100--Sobic003G236300 Sobic002G124100--Sobic006G263800 Sobic007G116100 Sobic007G116100 Sobic002G124100--Sobic007G116100 Sobic001G395300 Sobic001G395300 Sobic002G124100--Sobic001G395300 Sobic001G228300 Sobic001G228300 Sobic002G124100--Sobic001G228300 Sobic010G011200 Sobic010G011200 Sobic002G124100--Sobic010G011200 Sobic002G140000 Sobic002G140000 Sobic002G124100--Sobic002G140000 Sobic002G045700 Sobic002G045700 Sobic002G124100--Sobic002G045700 Sobic010G027200 Sobic010G027200 Sobic002G124100--Sobic010G027200 Sobic004G214400 Sobic004G214400 Sobic006G281066--Sobic004G214400 Sobic001G104300 Sobic001G104300 Sobic006G281066--Sobic001G104300 Sobic006G281066--Sobic001G543700 Sobic002G363500 Sobic002G363500 Sobic006G281066--Sobic002G363500 Sobic006G281066--Sobic001G395300 Sobic006G281066--Sobic003G236300 Sobic006G281066--Sobic010G027200 Sobic006G281066--Sobic002G140000 Sobic001G321400 Sobic001G321400 Sobic006G281066--Sobic001G321400 Sobic007G090415 Sobic007G090415 Sobic008G130700--Sobic007G090415 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic008G130700--Sobic003G157500 Sobic003G176200 Sobic003G176200 Sobic008G130700--Sobic003G176200 Sobic005G020200 Sobic005G020200 Sobic008G130700--Sobic005G020200 Sobic008G130700--Sobic005G141000 Sobic008G008500 Sobic008G008500 Sobic008G130700--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic008G130700--Sobic001G215300 Sobic010G221600 Sobic010G221600 Sobic001G543700--Sobic010G221600 Sobic001G543700--Sobic004G214400 Sobic001G543700--Sobic006G281066 Sobic001G543700--Sobic003G236300 Sobic006G082500 Sobic006G082500 Sobic001G543700--Sobic006G082500 Sobic004G296800 Sobic004G296800 Sobic001G543700--Sobic004G296800 Sobic003G071600 Sobic003G071600 Sobic001G543700--Sobic003G071600 Sobic003G265500 Sobic003G265500 Sobic001G543700--Sobic003G265500 Sobic001G478600 Sobic001G478600 Sobic001G543700--Sobic001G478600 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic002G065400 Sobic002G065400 Sobic005G141000--Sobic002G065400 Sobic005G141000--Sobic005G020200 Sobic001G229500 Sobic001G229500 Sobic005G141000--Sobic001G229500 Sobic004G038300 Sobic004G038300 Sobic005G141000--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic005G141000--Sobic002G209800 Sobic005G141000--Sobic007G090415 Sobic005G190800 Sobic005G190800 Sobic005G141000--Sobic005G190800 Sobic005G218201 Sobic005G218201 Sobic005G141000--Sobic005G218201 Sobic005G141000--Sobic008G130700 Sobic007G013400 Sobic007G013400 Sobic009G001500--Sobic007G013400 Sobic003G383500 Sobic003G383500 Sobic009G001500--Sobic003G383500 Sobic003G295800 Sobic003G295800 Sobic009G001500--Sobic003G295800 Sobic004G044200 Sobic004G044200 Sobic009G001500--Sobic004G044200 Sobic009G001500--Sobic004G044000 Sobic003G383600 Sobic003G383600 Sobic009G001500--Sobic003G383600 Sobic007G211100 Sobic007G211100 Sobic009G001500--Sobic007G211100 Sobic008G030000 Sobic008G030000 Sobic009G001500--Sobic008G030000 Sobic001G383900 Sobic001G383900 Sobic009G001500--Sobic001G383900 Sobic001G188600 Sobic001G188600 Sobic004G109000--Sobic001G188600 Sobic004G109000--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G109000--Sobic006G114300 Sobic004G109000--Sobic003G383500 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic004G109000--Sobic006G025700 Sobic004G109000--Sobic007G013400 Sobic004G109000--Sobic001G215300
Octagon: transcription factors


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