Gene annotation
Transcriptome id Sobic.003G038600.1
Synonym Sb03g003460
Functional annotation phosducin-like protein 3, putative, expressed
UniProt C5XMK8
Pfam PF02114
Panther DB PTHR21148 PTHR21148:SF1
NCBI CDD KOG3170; Conserved phosducin-like protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14240 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os01g08960.1 : phosducin-like protein 3, putative, expressed
MaizeGDB (Corn) Zm00025a023133 , Zm00025a041414
Brachypodium KQK03076
Barley -
Wheat TraesCS2A02G124900 , TraesCS2B02G147400 , TraesCS2D02G127800 , TraesCS3A02G112100 , TraesCS3D02G114100 , TraesCS3D02G114100 , TraesCS3B02G131900
Populus -


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cDNA sequences
Sobic.003G038600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G111700 expressed protein -
2 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
3 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
4 Sobic.002G272600 TBC domain containing protein, expressed -
5 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
6 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
7 Sobic.003G247900 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
8 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
9 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
10 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
11 Sobic.002G378300 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1
12 Sobic.003G062400 PHD finger protein, putative, expressed -
13 Sobic.006G110300 SAM domain containing protein, putative, expressed -
14 Sobic.001G408100 Yip1 domain containing protein, expressed -
15 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
16 Sobic.004G068500 CUE domain containing protein, expressed -
17 Sobic.006G225300 expressed protein -
18 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
19 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
20 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G038600 Sobic003G038600 Sobic008G111700 Sobic008G111700 Sobic003G038600--Sobic008G111700 Sobic007G111100 Sobic007G111100 Sobic003G038600--Sobic007G111100 Sobic010G017000 Sobic010G017000 Sobic003G038600--Sobic010G017000 Sobic002G272600 Sobic002G272600 Sobic003G038600--Sobic002G272600 Sobic006G002500 Sobic006G002500 Sobic003G038600--Sobic006G002500 Sobic009G258400 Sobic009G258400 Sobic003G038600--Sobic009G258400 Sobic003G247900 Sobic003G247900 Sobic003G038600--Sobic003G247900 Sobic003G005200 Sobic003G005200 Sobic003G038600--Sobic003G005200 Sobic010G235200 Sobic010G235200 Sobic003G038600--Sobic010G235200 Sobic001G285300 Sobic001G285300 Sobic008G111700--Sobic001G285300 Sobic008G111700--Sobic003G038600 Sobic001G448200 Sobic001G448200 Sobic008G111700--Sobic001G448200 Sobic001G349400 Sobic001G349400 Sobic008G111700--Sobic001G349400 Sobic008G111700--Sobic003G247900 Sobic003G031200 Sobic003G031200 Sobic008G111700--Sobic003G031200 Sobic003G043400 Sobic003G043400 Sobic008G111700--Sobic003G043400 Sobic006G094600 Sobic006G094600 Sobic008G111700--Sobic006G094600 Sobic006G261100 Sobic006G261100 Sobic008G111700--Sobic006G261100 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic006G222400 Sobic006G222400 Sobic010G017000--Sobic006G222400 Sobic006G217700 Sobic006G217700 Sobic010G017000--Sobic006G217700 Sobic003G021200 Sobic003G021200 Sobic010G017000--Sobic003G021200 Sobic003G052400 Sobic003G052400 Sobic010G017000--Sobic003G052400 Sobic009G160200 Sobic009G160200 Sobic010G017000--Sobic009G160200 Sobic010G017000--Sobic003G038600 Sobic007G059900 Sobic007G059900 Sobic010G017000--Sobic007G059900 Sobic001G283500 Sobic001G283500 Sobic010G017000--Sobic001G283500 Sobic009G008600 Sobic009G008600 Sobic010G017000--Sobic009G008600 Sobic001G061700 Sobic001G061700 Sobic002G272600--Sobic001G061700 Sobic001G080000 Sobic001G080000 Sobic002G272600--Sobic001G080000 Sobic002G272600--Sobic001G143500 Sobic003G405700 Sobic003G405700 Sobic002G272600--Sobic003G405700 Sobic010G105600 Sobic010G105600 Sobic002G272600--Sobic010G105600 Sobic007G205000 Sobic007G205000 Sobic002G272600--Sobic007G205000 Sobic002G272600--Sobic003G038600 Sobic003G350600 Sobic003G350600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100 Sobic009G246950 Sobic009G246950 Sobic006G002500--Sobic009G246950 Sobic002G256300 Sobic002G256300 Sobic006G002500--Sobic002G256300 Sobic006G002500--Sobic001G390500 Sobic007G203700 Sobic007G203700 Sobic006G002500--Sobic007G203700 Sobic001G532100 Sobic001G532100 Sobic006G002500--Sobic001G532100 Sobic010G193800 Sobic010G193800 Sobic006G002500--Sobic010G193800 Sobic001G512900 Sobic001G512900 Sobic006G002500--Sobic001G512900 Sobic006G002500--Sobic003G038600 Sobic003G189900 Sobic003G189900 Sobic006G002500--Sobic003G189900 Sobic001G168900 Sobic001G168900 Sobic009G258400--Sobic001G168900 Sobic006G120800 Sobic006G120800 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic001G114500 Sobic001G114500 Sobic009G258400--Sobic001G114500 Sobic009G036200 Sobic009G036200 Sobic009G258400--Sobic009G036200 Sobic002G077900 Sobic002G077900 Sobic009G258400--Sobic002G077900 Sobic001G291800 Sobic001G291800 Sobic009G258400--Sobic001G291800 Sobic003G132000 Sobic003G132000 Sobic009G258400--Sobic003G132000 Sobic001G507400 Sobic001G507400 Sobic009G258400--Sobic001G507400 Sobic003G247900--Sobic003G038600 Sobic003G247900--Sobic010G219100 Sobic003G247900--Sobic001G507400 Sobic003G247900--Sobic008G111700 Sobic003G247900--Sobic001G285300 Sobic003G247900--Sobic001G532100 Sobic003G247900--Sobic002G272600 Sobic003G247900--Sobic006G094600 Sobic003G247900--Sobic002G077900 Sobic002G300700 Sobic002G300700 Sobic003G005200--Sobic002G300700 Sobic009G160600 Sobic009G160600 Sobic003G005200--Sobic009G160600 Sobic001G360200 Sobic001G360200 Sobic003G005200--Sobic001G360200 Sobic006G225300 Sobic006G225300 Sobic003G005200--Sobic006G225300 Sobic002G281300 Sobic002G281300 Sobic003G005200--Sobic002G281300 Sobic003G005200--Sobic004G091200 Sobic003G005200--Sobic003G038600 Sobic003G005200--Sobic003G021200 Sobic009G058500 Sobic009G058500 Sobic003G005200--Sobic009G058500 Sobic004G307600 Sobic004G307600 Sobic010G235200--Sobic004G307600 Sobic004G228800 Sobic004G228800 Sobic010G235200--Sobic004G228800 Sobic007G093800 Sobic007G093800 Sobic010G235200--Sobic007G093800 Sobic010G264000 Sobic010G264000 Sobic010G235200--Sobic010G264000 Sobic008G124900 Sobic008G124900 Sobic010G235200--Sobic008G124900 Sobic004G323700 Sobic004G323700 Sobic010G235200--Sobic004G323700 Sobic009G131900 Sobic009G131900 Sobic010G235200--Sobic009G131900 Sobic002G303600 Sobic002G303600 Sobic010G235200--Sobic002G303600 Sobic003G312200 Sobic003G312200 Sobic010G235200--Sobic003G312200
Octagon: transcription factors


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