Gene annotation
Transcriptome id Sobic.006G225300.2,Sobic.006G225300.1
Synonym PEX22, Sb06g029430
Functional annotation expressed protein
UniProt C5YGK2 , A0A1Z5RG30
Pfam -
Panther DB PTHR34126 PTHR34126:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21865 : peroxin 22
RAP-DB (Rice) LOC_Os04g53690.1 : expressed protein
MaizeGDB (Corn) Zm00025a009671 , Zm00025a057087
Brachypodium KQJ84772
Barley -
Wheat TraesCS2D02G478500 , TraesCS2D02G478500 , TraesCS2D02G478500 , TraesCS2B02G503600 , TraesCS2A02G479400 , TraesCS2A02G479400
Populus -


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cDNA sequences
Sobic.006G225300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
2 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
3 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
5 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
6 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
8 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
9 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
10 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
11 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
12 Sobic.006G183000 RING zinc finger protein, putative, expressed -
13 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.002G129000 RING zinc finger protein, putative, expressed -
15 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
16 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
17 Sobic.009G050700 importin subunit alpha, putative, expressed -
18 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
19 Sobic.007G166400 mediator of RNA polymerase II transcription subunit 31, putative, expressed K15153: MED31, mediator of RNA polymerase II transcription subunit 31
20 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1


Gene co-expression network
sample Sobic006G225300 Sobic006G225300 Sobic001G294900 Sobic001G294900 Sobic006G225300--Sobic001G294900 Sobic003G201900 Sobic003G201900 Sobic006G225300--Sobic003G201900 Sobic010G193800 Sobic010G193800 Sobic006G225300--Sobic010G193800 Sobic009G083200 Sobic009G083200 Sobic006G225300--Sobic009G083200 Sobic001G439600 Sobic001G439600 Sobic006G225300--Sobic001G439600 Sobic002G256300 Sobic002G256300 Sobic006G225300--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic006G225300--Sobic001G532100 Sobic004G104900 Sobic004G104900 Sobic006G225300--Sobic004G104900 Sobic009G135600 Sobic009G135600 Sobic006G225300--Sobic009G135600 Sobic008G137600 Sobic008G137600 Sobic001G294900--Sobic008G137600 Sobic003G349300 Sobic003G349300 Sobic001G294900--Sobic003G349300 Sobic001G294900--Sobic006G225300 Sobic001G294900--Sobic001G439600 Sobic006G183000 Sobic006G183000 Sobic001G294900--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic001G294900--Sobic009G135600 Sobic006G109700 Sobic006G109700 Sobic001G294900--Sobic006G109700 Sobic003G201900--Sobic006G225300 Sobic002G385900 Sobic002G385900 Sobic003G201900--Sobic002G385900 Sobic003G201900--Sobic002G256300 Sobic003G416400 Sobic003G416400 Sobic003G201900--Sobic003G416400 Sobic003G312200 Sobic003G312200 Sobic003G201900--Sobic003G312200 Sobic007G139700 Sobic007G139700 Sobic003G201900--Sobic007G139700 Sobic001G313500 Sobic001G313500 Sobic003G201900--Sobic001G313500 Sobic003G201900--Sobic009G135600 Sobic001G114500 Sobic001G114500 Sobic003G201900--Sobic001G114500 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic010G193800--Sobic001G532100 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic009G246950 Sobic009G246950 Sobic010G193800--Sobic009G246950 Sobic009G083200--Sobic006G225300 Sobic009G083200--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic009G083200--Sobic004G226800 Sobic009G083200--Sobic002G256300 Sobic009G058500 Sobic009G058500 Sobic009G083200--Sobic009G058500 Sobic007G014900 Sobic007G014900 Sobic009G083200--Sobic007G014900 Sobic010G083700 Sobic010G083700 Sobic009G083200--Sobic010G083700 Sobic009G083200--Sobic004G356900 Sobic010G209000 Sobic010G209000 Sobic009G083200--Sobic010G209000 Sobic003G124800 Sobic003G124800 Sobic001G439600--Sobic003G124800 Sobic001G439600--Sobic002G129000 Sobic001G439600--Sobic010G083700 Sobic001G439600--Sobic001G294900 Sobic001G136900 Sobic001G136900 Sobic001G439600--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic001G439600--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic001G439600--Sobic010G168600 Sobic001G439600--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic001G439600--Sobic001G529000 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic002G256300--Sobic001G136900 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic002G256300--Sobic009G171700 Sobic001G532100--Sobic008G137600 Sobic001G036700 Sobic001G036700 Sobic001G532100--Sobic001G036700 Sobic001G532100--Sobic010G193800 Sobic001G285300 Sobic001G285300 Sobic001G532100--Sobic001G285300 Sobic001G532100--Sobic001G294900 Sobic007G152400 Sobic007G152400 Sobic001G532100--Sobic007G152400 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic004G104900--Sobic002G256300 Sobic004G104900--Sobic010G083700 Sobic004G104900--Sobic010G168600 Sobic010G018700 Sobic010G018700 Sobic004G104900--Sobic010G018700 Sobic003G007500 Sobic003G007500 Sobic004G104900--Sobic003G007500 Sobic004G066200 Sobic004G066200 Sobic004G104900--Sobic004G066200 Sobic009G228700 Sobic009G228700 Sobic004G104900--Sobic009G228700 Sobic001G007200 Sobic001G007200 Sobic004G104900--Sobic001G007200 Sobic004G104900--Sobic009G246950 Sobic001G461900 Sobic001G461900 Sobic009G135600--Sobic001G461900 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic009G135600--Sobic002G385900 Sobic001G388200 Sobic001G388200 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic009G135600--Sobic001G294900 Sobic009G135600--Sobic001G054200
Octagon: transcription factors


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