Gene annotation
Transcriptome id Sobic.002G378300.1
Synonym Sb02g039540, GB1, ATARLB1, ATGB1
Functional annotation ADP-ribosylation factor, putative, expressed
UniProt C5X2G4
Pfam PF00071
Panther DB PTHR11711 PTHR11711:SF187
NCBI CDD KOG0076; GTP-binding ADP-ribosylation factor-like protein yARL3
KEGG Orthology K07952; ADP-ribosylation factor related protein 1
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT5G52210 : GTP-binding protein 1
RAP-DB (Rice) LOC_Os07g42820.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a048784
Brachypodium KQK15201 , KQK15200 , KQK15203 , KQK15202 , PNT74737
Barley HORVU1Hr1G014610.7 , HORVU1Hr1G014610.6 , HORVU1Hr1G014610.4 , HORVU1Hr1G014610.3 , HORVU1Hr1G014610.2 , HORVU1Hr1G014610.1
Wheat TraesCS2B02G191100 , TraesCS1B02G087700 , TraesCS1D02G072000 , TraesCS1A02G069400
Populus -


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cDNA sequences
Sobic.002G378300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.006G225300 expressed protein -
3 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
4 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
5 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
6 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
7 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
8 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
9 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
10 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
11 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
12 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
13 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
14 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
15 Sobic.008G180900 YIF1B, putative, expressed -
16 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
17 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
18 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
19 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
20 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22


Gene co-expression network
sample Sobic002G378300 Sobic002G378300 Sobic002G256300 Sobic002G256300 Sobic002G378300--Sobic002G256300 Sobic006G225300 Sobic006G225300 Sobic002G378300--Sobic006G225300 Sobic001G313500 Sobic001G313500 Sobic002G378300--Sobic001G313500 Sobic002G090700 Sobic002G090700 Sobic002G378300--Sobic002G090700 Sobic003G038600 Sobic003G038600 Sobic002G378300--Sobic003G038600 Sobic002G040700 Sobic002G040700 Sobic002G378300--Sobic002G040700 Sobic009G160200 Sobic009G160200 Sobic002G378300--Sobic009G160200 Sobic003G007500 Sobic003G007500 Sobic002G378300--Sobic003G007500 Sobic003G201900 Sobic003G201900 Sobic002G378300--Sobic003G201900 Sobic009G246950 Sobic009G246950 Sobic002G256300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic010G168600 Sobic010G168600 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic001G439600 Sobic001G439600 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic002G256300--Sobic009G171700 Sobic001G294900 Sobic001G294900 Sobic006G225300--Sobic001G294900 Sobic006G225300--Sobic003G201900 Sobic006G225300--Sobic010G193800 Sobic009G083200 Sobic009G083200 Sobic006G225300--Sobic009G083200 Sobic006G225300--Sobic001G439600 Sobic006G225300--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic006G225300--Sobic001G532100 Sobic006G225300--Sobic004G104900 Sobic009G135600 Sobic009G135600 Sobic006G225300--Sobic009G135600 Sobic001G421400 Sobic001G421400 Sobic001G313500--Sobic001G421400 Sobic001G512400 Sobic001G512400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G161900 Sobic001G161900 Sobic001G313500--Sobic001G161900 Sobic010G129600 Sobic010G129600 Sobic001G313500--Sobic010G129600 Sobic001G313500--Sobic009G135600 Sobic010G261600 Sobic010G261600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic003G116600 Sobic003G116600 Sobic002G090700--Sobic003G116600 Sobic010G007400 Sobic010G007400 Sobic002G090700--Sobic010G007400 Sobic003G217100 Sobic003G217100 Sobic002G090700--Sobic003G217100 Sobic004G159000 Sobic004G159000 Sobic002G090700--Sobic004G159000 Sobic003G152900 Sobic003G152900 Sobic002G090700--Sobic003G152900 Sobic004G066800 Sobic004G066800 Sobic002G090700--Sobic004G066800 Sobic001G309500 Sobic001G309500 Sobic002G090700--Sobic001G309500 Sobic002G078400 Sobic002G078400 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic008G111700 Sobic008G111700 Sobic003G038600--Sobic008G111700 Sobic007G111100 Sobic007G111100 Sobic003G038600--Sobic007G111100 Sobic010G017000 Sobic010G017000 Sobic003G038600--Sobic010G017000 Sobic002G272600 Sobic002G272600 Sobic003G038600--Sobic002G272600 Sobic006G002500 Sobic006G002500 Sobic003G038600--Sobic006G002500 Sobic009G258400 Sobic009G258400 Sobic003G038600--Sobic009G258400 Sobic003G247900 Sobic003G247900 Sobic003G038600--Sobic003G247900 Sobic003G005200 Sobic003G005200 Sobic003G038600--Sobic003G005200 Sobic010G235200 Sobic010G235200 Sobic003G038600--Sobic010G235200 Sobic002G040700--Sobic001G512400 Sobic002G040700--Sobic001G439600 Sobic008G165000 Sobic008G165000 Sobic002G040700--Sobic008G165000 Sobic001G105500 Sobic001G105500 Sobic002G040700--Sobic001G105500 Sobic007G118000 Sobic007G118000 Sobic002G040700--Sobic007G118000 Sobic004G010900 Sobic004G010900 Sobic002G040700--Sobic004G010900 Sobic002G040700--Sobic003G116600 Sobic001G048700 Sobic001G048700 Sobic002G040700--Sobic001G048700 Sobic001G367000 Sobic001G367000 Sobic002G040700--Sobic001G367000 Sobic001G283500 Sobic001G283500 Sobic009G160200--Sobic001G283500 Sobic006G222400 Sobic006G222400 Sobic009G160200--Sobic006G222400 Sobic001G311100 Sobic001G311100 Sobic009G160200--Sobic001G311100 Sobic009G160200--Sobic010G017000 Sobic009G160200--Sobic003G217100 Sobic002G261900 Sobic002G261900 Sobic009G160200--Sobic002G261900 Sobic010G094600 Sobic010G094600 Sobic009G160200--Sobic010G094600 Sobic003G043400 Sobic003G043400 Sobic009G160200--Sobic003G043400 Sobic003G052400 Sobic003G052400 Sobic009G160200--Sobic003G052400 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic003G201900--Sobic006G225300 Sobic003G201900--Sobic002G385900 Sobic003G201900--Sobic002G256300 Sobic003G416400 Sobic003G416400 Sobic003G201900--Sobic003G416400 Sobic003G312200 Sobic003G312200 Sobic003G201900--Sobic003G312200 Sobic007G139700 Sobic007G139700 Sobic003G201900--Sobic007G139700 Sobic003G201900--Sobic001G313500 Sobic003G201900--Sobic009G135600 Sobic001G114500 Sobic001G114500 Sobic003G201900--Sobic001G114500
Octagon: transcription factors


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