Gene annotation
Transcriptome id Sobic.003G030800.1
Synonym Sb03g002890, PRA1.F3, PRA8
Functional annotation prenylated rab acceptor, putative, expressed
UniProt C5XLV6
Pfam PF03208
Panther DB PTHR19317 PTHR19317:SF2
NCBI CDD KOG3142; Prenylated rab acceptor 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55190 : PRA1 (Prenylated rab acceptor) family protein
RAP-DB (Rice) LOC_Os01g10010.1 : prenylated rab acceptor, putative, expressed
MaizeGDB (Corn) Zm00025a023005
Brachypodium KQK03162 , KQK07100
Barley HORVU3Hr1G018940.1 , HORVU3Hr1G018940.3 , HORVU3Hr1G018940.2
Wheat TraesCS3A02G104300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G105100 neighbor of COX4, putative, expressed -
2 Sobic.010G065400 X0001, putative, expressed -
3 Sobic.009G168000 selT-like protein precursor, putative, expressed -
4 Sobic.003G052400 proline-rich family protein, putative, expressed -
5 Sobic.001G420700 clathrin assembly protein, putative, expressed -
6 Sobic.008G132800 expressed protein -
7 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
8 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
9 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
10 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
11 Sobic.008G003600 PMR5, putative, expressed -
12 Sobic.008G138600 SCARECROW, putative, expressed -
13 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
14 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.005G105500 expressed protein -
16 Sobic.003G217100 Yip1 domain containing protein, expressed -
17 Sobic.003G273400 glycylpeptide N-tetradecanoyltransferase 1, putative, expressed K00671: glycylpeptide N-tetradecanoyltransferase
18 Sobic.006G207500 expressed protein -
19 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
20 Sobic.006G257001 - -


Gene co-expression network
sample Sobic003G030800 Sobic003G030800 Sobic001G105100 Sobic001G105100 Sobic003G030800--Sobic001G105100 Sobic010G065400 Sobic010G065400 Sobic003G030800--Sobic010G065400 Sobic009G168000 Sobic009G168000 Sobic003G030800--Sobic009G168000 Sobic003G052400 Sobic003G052400 Sobic003G030800--Sobic003G052400 Sobic001G420700 Sobic001G420700 Sobic003G030800--Sobic001G420700 Sobic008G132800 Sobic008G132800 Sobic003G030800--Sobic008G132800 Sobic004G164000 Sobic004G164000 Sobic003G030800--Sobic004G164000 Sobic006G109700 Sobic006G109700 Sobic003G030800--Sobic006G109700 Sobic010G212200 Sobic010G212200 Sobic003G030800--Sobic010G212200 Sobic001G067900 Sobic001G067900 Sobic001G105100--Sobic001G067900 Sobic003G217100 Sobic003G217100 Sobic001G105100--Sobic003G217100 Sobic001G105100--Sobic008G132800 Sobic006G257001 Sobic006G257001 Sobic001G105100--Sobic006G257001 Sobic006G034800 Sobic006G034800 Sobic001G105100--Sobic006G034800 Sobic010G105600 Sobic010G105600 Sobic001G105100--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic002G078400 Sobic002G078400 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic001G502200 Sobic001G502200 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic004G196300 Sobic004G196300 Sobic010G065400--Sobic004G196300 Sobic003G362400 Sobic003G362400 Sobic010G065400--Sobic003G362400 Sobic005G111100 Sobic005G111100 Sobic010G065400--Sobic005G111100 Sobic009G198500 Sobic009G198500 Sobic010G065400--Sobic009G198500 Sobic009G168000--Sobic002G078400 Sobic007G091000 Sobic007G091000 Sobic009G168000--Sobic007G091000 Sobic009G168000--Sobic010G065400 Sobic009G168000--Sobic006G109700 Sobic009G168000--Sobic008G127500 Sobic003G305100 Sobic003G305100 Sobic009G168000--Sobic003G305100 Sobic010G038700 Sobic010G038700 Sobic009G168000--Sobic010G038700 Sobic009G168000--Sobic001G502200 Sobic003G277000 Sobic003G277000 Sobic009G168000--Sobic003G277000 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic003G052400--Sobic006G257001 Sobic003G052400--Sobic001G237500 Sobic005G046100 Sobic005G046100 Sobic001G420700--Sobic005G046100 Sobic008G188700 Sobic008G188700 Sobic001G420700--Sobic008G188700 Sobic007G136700 Sobic007G136700 Sobic001G420700--Sobic007G136700 Sobic001G441600 Sobic001G441600 Sobic001G420700--Sobic001G441600 Sobic003G116700 Sobic003G116700 Sobic001G420700--Sobic003G116700 Sobic004G150400 Sobic004G150400 Sobic001G420700--Sobic004G150400 Sobic003G424400 Sobic003G424400 Sobic001G420700--Sobic003G424400 Sobic003G317200 Sobic003G317200 Sobic001G420700--Sobic003G317200 Sobic001G069800 Sobic001G069800 Sobic001G420700--Sobic001G069800 Sobic010G029400 Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic001G331900 Sobic001G331900 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic008G132800--Sobic001G105100 Sobic005G157200 Sobic005G157200 Sobic008G132800--Sobic005G157200 Sobic008G132800--Sobic010G065400 Sobic008G132800--Sobic003G217100 Sobic003G131300 Sobic003G131300 Sobic004G164000--Sobic003G131300 Sobic007G019501 Sobic007G019501 Sobic004G164000--Sobic007G019501 Sobic009G001900 Sobic009G001900 Sobic004G164000--Sobic009G001900 Sobic004G159000 Sobic004G159000 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic001G392800 Sobic001G392800 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic008G136800 Sobic008G136800 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G183000 Sobic006G183000 Sobic006G109700--Sobic006G183000 Sobic001G294900 Sobic001G294900 Sobic006G109700--Sobic001G294900 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic006G109700--Sobic001G502200 Sobic001G060300 Sobic001G060300 Sobic010G212200--Sobic001G060300 Sobic004G262300 Sobic004G262300 Sobic010G212200--Sobic004G262300 Sobic010G212200--Sobic001G392800 Sobic001G145500 Sobic001G145500 Sobic010G212200--Sobic001G145500 Sobic001G451901 Sobic001G451901 Sobic010G212200--Sobic001G451901 Sobic003G330500 Sobic003G330500 Sobic010G212200--Sobic003G330500 Sobic010G212200--Sobic004G164000 Sobic002G402500 Sobic002G402500 Sobic010G212200--Sobic002G402500 Sobic001G240500 Sobic001G240500 Sobic010G212200--Sobic001G240500
Octagon: transcription factors


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