Gene annotation
Transcriptome id Sobic.003G405700.1
Synonym EXO70F1, ATEXO70F1, Sb03g044110
Functional annotation exo70 exocyst complex subunit domain containing protein, expressed
UniProt C5XGB4
Pfam PF03081
Panther DB PTHR12542 PTHR12542:SF22
NCBI CDD -
KEGG Orthology K07195; EXOC7, exocyst complex component 7
Gene Ontology GO:0006887; exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT5G50380 : exocyst subunit exo70 family protein F1
RAP-DB (Rice) LOC_Os01g69230.1 : exo70 exocyst complex subunit domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039290 , Zm00025a020390 , Zm00025a055871 , Zm00025a026253
Brachypodium KQJ99568 , PNT60897 , KQK11259 , PNT60898 , KQJ82243
Barley HORVU7Hr1G028060.3 , HORVU7Hr1G028060.9 , HORVU3Hr1G094570.1 , HORVU3Hr1G094570.2 , HORVU3Hr1G094570.3 , HORVU3Hr1G094570.4 , HORVU3Hr1G094570.5 , HORVU3Hr1G094570.6 , HORVU3Hr1G094570.7 , HORVU7Hr1G028060.6 , HORVU7Hr1G028060.11 , HORVU7Hr1G028060.10 , HORVU7Hr1G028060.12
Wheat TraesCS3B02G467500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G405700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G305600 SKIP/SNW domain containing protein, expressed K06063: SNW1, SKIIP, SNW domain-containing protein 1
2 Sobic.001G080000 expressed protein -
3 Sobic.006G183000 RING zinc finger protein, putative, expressed -
4 Sobic.002G129000 RING zinc finger protein, putative, expressed -
5 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
6 Sobic.009G050700 importin subunit alpha, putative, expressed -
7 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
8 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
9 Sobic.002G272600 TBC domain containing protein, expressed -
10 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
11 Sobic.002G180000 protein kinase domain containing protein, expressed -
12 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
13 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
14 Sobic.004G250300 eukaryotic aspartyl protease domain containing protein, expressed -
15 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -
16 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
17 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
19 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
20 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7


Gene co-expression network
sample Sobic003G405700 Sobic003G405700 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic001G080000 Sobic001G080000 Sobic003G405700--Sobic001G080000 Sobic006G183000 Sobic006G183000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic009G050700 Sobic009G050700 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic003G405700--Sobic002G272600 Sobic004G305600--Sobic004G059000 Sobic004G305600--Sobic003G405700 Sobic003G250500 Sobic003G250500 Sobic004G305600--Sobic003G250500 Sobic002G256300 Sobic002G256300 Sobic004G305600--Sobic002G256300 Sobic003G127400 Sobic003G127400 Sobic004G305600--Sobic003G127400 Sobic005G000800 Sobic005G000800 Sobic004G305600--Sobic005G000800 Sobic009G246950 Sobic009G246950 Sobic004G305600--Sobic009G246950 Sobic001G512900 Sobic001G512900 Sobic004G305600--Sobic001G512900 Sobic004G253000 Sobic004G253000 Sobic004G305600--Sobic004G253000 Sobic001G080000--Sobic003G405700 Sobic008G139700 Sobic008G139700 Sobic001G080000--Sobic008G139700 Sobic001G080000--Sobic002G272600 Sobic002G180000 Sobic002G180000 Sobic001G080000--Sobic002G180000 Sobic001G080000--Sobic010G105600 Sobic001G143500 Sobic001G143500 Sobic001G080000--Sobic001G143500 Sobic001G010600 Sobic001G010600 Sobic001G080000--Sobic001G010600 Sobic003G045400 Sobic003G045400 Sobic001G080000--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic001G080000--Sobic007G205000 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic006G183000--Sobic001G136900 Sobic006G183000--Sobic009G050700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600 Sobic002G129000--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic002G129000--Sobic001G439600 Sobic002G129000--Sobic009G050700 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic002G129000--Sobic010G168600 Sobic002G129000--Sobic001G136900 Sobic006G263900 Sobic006G263900 Sobic002G129000--Sobic006G263900 Sobic002G129000--Sobic003G405700 Sobic001G237500 Sobic001G237500 Sobic010G105600--Sobic001G237500 Sobic001G105100 Sobic001G105100 Sobic010G105600--Sobic001G105100 Sobic010G105600--Sobic003G405700 Sobic001G067900 Sobic001G067900 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic006G257001 Sobic006G257001 Sobic010G105600--Sobic006G257001 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic006G034800 Sobic006G034800 Sobic010G105600--Sobic006G034800 Sobic009G050700--Sobic002G129000 Sobic009G050700--Sobic006G183000 Sobic009G050700--Sobic003G405700 Sobic006G278700 Sobic006G278700 Sobic009G050700--Sobic006G278700 Sobic006G101700 Sobic006G101700 Sobic009G050700--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic009G050700--Sobic004G356900 Sobic006G225300 Sobic006G225300 Sobic009G050700--Sobic006G225300 Sobic003G226500 Sobic003G226500 Sobic009G050700--Sobic003G226500 Sobic001G085100 Sobic001G085100 Sobic009G050700--Sobic001G085100 Sobic001G136900--Sobic001G439600 Sobic001G136900--Sobic002G256300 Sobic004G316900 Sobic004G316900 Sobic001G136900--Sobic004G316900 Sobic010G083700 Sobic010G083700 Sobic001G136900--Sobic010G083700 Sobic001G136900--Sobic006G263900 Sobic001G136900--Sobic002G129000 Sobic001G136900--Sobic006G183000 Sobic006G262900 Sobic006G262900 Sobic001G136900--Sobic006G262900 Sobic001G129300 Sobic001G129300 Sobic001G136900--Sobic001G129300 Sobic004G059000--Sobic004G305600 Sobic004G059000--Sobic001G061700 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic004G059000--Sobic003G405700 Sobic002G272600--Sobic001G061700 Sobic002G272600--Sobic001G080000 Sobic002G272600--Sobic001G143500 Sobic002G272600--Sobic003G405700 Sobic002G272600--Sobic010G105600 Sobic002G272600--Sobic007G205000 Sobic003G038600 Sobic003G038600 Sobic002G272600--Sobic003G038600 Sobic003G350600 Sobic003G350600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.