Gene annotation
Transcriptome id Sobic.008G139700.1
Synonym TAF8, Sb08g019060
Functional annotation bromodomain associated family protein, expressed
UniProt C5YQC1
Pfam PF10406 PF07524
Panther DB PTHR12321 PTHR12321:SF31
NCBI CDD KOG2389; Predicted bromodomain transcription factor
KEGG Orthology K14649; transcription initiation factor TFIID subunit 8
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34340 : TBP-associated factor 8
RAP-DB (Rice) LOC_Os12g38620.2 : bromodomain associated family protein, expressed
MaizeGDB (Corn) Zm00025a004290 , Zm00025a025624 , Zm00025a025395
Brachypodium KQJ86186 , PNT62467
Barley HORVU5Hr1G020510.33 , HORVU5Hr1G020510.1 , HORVU5Hr1G020510.29
Wheat -
Populus -


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cDNA sequences
Sobic.008G139700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
3 Sobic.001G080000 expressed protein -
4 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
5 Sobic.002G180000 protein kinase domain containing protein, expressed -
6 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
7 Sobic.007G205000 zinc finger family protein, putative, expressed -
8 Sobic.006G267300 expressed protein -
9 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
10 Sobic.001G010600 U2 small nuclear ribonucleoprotein A, putative, expressed K11092: U2 small nuclear ribonucleoprotein A'
11 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
12 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
13 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
14 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
15 Sobic.002G272600 TBC domain containing protein, expressed -
16 Sobic.007G086500 expressed protein K16584: HAUS augmin-like complex subunit 1
17 Sobic.009G140700 PHD finger protein, putative, expressed -
18 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.001G261456 - -
20 Sobic.001G028400 domain of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic008G139700 Sobic008G139700 Sobic002G313500 Sobic002G313500 Sobic008G139700--Sobic002G313500 Sobic010G017800 Sobic010G017800 Sobic008G139700--Sobic010G017800 Sobic001G080000 Sobic001G080000 Sobic008G139700--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic008G139700--Sobic001G143500 Sobic002G180000 Sobic002G180000 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic008G139700--Sobic007G205000 Sobic006G267300 Sobic006G267300 Sobic008G139700--Sobic006G267300 Sobic010G105600 Sobic010G105600 Sobic008G139700--Sobic010G105600 Sobic002G313500--Sobic001G143500 Sobic001G371200 Sobic001G371200 Sobic002G313500--Sobic001G371200 Sobic004G350100 Sobic004G350100 Sobic002G313500--Sobic004G350100 Sobic002G378200 Sobic002G378200 Sobic002G313500--Sobic002G378200 Sobic004G283000 Sobic004G283000 Sobic002G313500--Sobic004G283000 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic002G313500--Sobic010G017800 Sobic010G017800--Sobic002G313500 Sobic001G518400 Sobic001G518400 Sobic010G017800--Sobic001G518400 Sobic010G017800--Sobic008G139700 Sobic001G335900 Sobic001G335900 Sobic010G017800--Sobic001G335900 Sobic009G229600 Sobic009G229600 Sobic010G017800--Sobic009G229600 Sobic004G325400 Sobic004G325400 Sobic010G017800--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic010G017800--Sobic005G216300 Sobic010G017800--Sobic001G371200 Sobic003G340900 Sobic003G340900 Sobic010G017800--Sobic003G340900 Sobic003G405700 Sobic003G405700 Sobic001G080000--Sobic003G405700 Sobic001G080000--Sobic008G139700 Sobic002G272600 Sobic002G272600 Sobic001G080000--Sobic002G272600 Sobic001G080000--Sobic002G180000 Sobic001G080000--Sobic010G105600 Sobic001G080000--Sobic001G143500 Sobic001G010600 Sobic001G010600 Sobic001G080000--Sobic001G010600 Sobic001G080000--Sobic003G045400 Sobic001G080000--Sobic007G205000 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic001G143500--Sobic002G313500 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic001G143500--Sobic006G267300 Sobic002G180000--Sobic007G111100 Sobic002G180000--Sobic001G143500 Sobic002G180000--Sobic008G139700 Sobic006G065800 Sobic006G065800 Sobic002G180000--Sobic006G065800 Sobic002G180000--Sobic006G267300 Sobic001G131800 Sobic001G131800 Sobic002G180000--Sobic001G131800 Sobic002G180000--Sobic002G272600 Sobic002G180000--Sobic001G080000 Sobic002G180000--Sobic003G405700 Sobic001G467000 Sobic001G467000 Sobic003G045400--Sobic001G467000 Sobic006G242300 Sobic006G242300 Sobic003G045400--Sobic006G242300 Sobic010G211300 Sobic010G211300 Sobic003G045400--Sobic010G211300 Sobic003G045400--Sobic008G139700 Sobic003G045400--Sobic002G313500 Sobic001G307900 Sobic001G307900 Sobic003G045400--Sobic001G307900 Sobic004G072800 Sobic004G072800 Sobic003G045400--Sobic004G072800 Sobic009G140700 Sobic009G140700 Sobic003G045400--Sobic009G140700 Sobic003G045400--Sobic001G143500 Sobic001G028400 Sobic001G028400 Sobic007G205000--Sobic001G028400 Sobic007G205000--Sobic006G278700 Sobic007G118200 Sobic007G118200 Sobic007G205000--Sobic007G118200 Sobic009G198100 Sobic009G198100 Sobic007G205000--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic007G205000--Sobic010G033400 Sobic004G013600 Sobic004G013600 Sobic007G205000--Sobic004G013600 Sobic007G205000--Sobic006G267300 Sobic007G205000--Sobic001G010600 Sobic007G205000--Sobic004G350100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic008G127400 Sobic008G127400 Sobic006G267300--Sobic008G127400 Sobic001G237500 Sobic001G237500 Sobic010G105600--Sobic001G237500 Sobic001G105100 Sobic001G105100 Sobic010G105600--Sobic001G105100 Sobic010G105600--Sobic003G405700 Sobic001G067900 Sobic001G067900 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic006G257001 Sobic006G257001 Sobic010G105600--Sobic006G257001 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic006G034800 Sobic006G034800 Sobic010G105600--Sobic006G034800
Octagon: transcription factors


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