Gene annotation
Transcriptome id Sobic.001G371200.3,Sobic.001G371200.1,Sobic.001G371200.2,Sobic.001G371200.4
Synonym
Functional annotation SAC3/GANP family protein, putative, expressed
UniProt A0A1B6QN68 , A0A1Z5S9J6 , A0A1Z5S9I2
Pfam PF03399
Panther DB PTHR12436
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54380 : SAC3/GANP/Nin1/mts3/eIF-3 p25 family
RAP-DB (Rice) LOC_Os03g22870.4,LOC_Os03g22870.1,LOC_Os03g22870.2 : SAC3/GANP family protein, putative, expressed
MaizeGDB (Corn) Zm00025a052371
Brachypodium KQK21676
Barley -
Wheat TraesCS1B02G271000 , TraesCS1D02G260400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
2 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
3 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
4 Sobic.006G252700 protein kinase domain containing protein, expressed -
5 Sobic.006G278700 expressed protein -
6 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
7 Sobic.007G200600 ZOS8-11 - C2H2 zinc finger protein, expressed -
8 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
10 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
11 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
12 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
13 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
14 Sobic.003G187200 phox domain-containing protein, putative, expressed -
15 Sobic.007G104800 expressed protein -
16 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.001G261456 - -
18 Sobic.007G205000 zinc finger family protein, putative, expressed -
19 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
20 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G371200 Sobic001G371200 Sobic007G118200 Sobic007G118200 Sobic001G371200--Sobic007G118200 Sobic002G313500 Sobic002G313500 Sobic001G371200--Sobic002G313500 Sobic001G466700 Sobic001G466700 Sobic001G371200--Sobic001G466700 Sobic006G252700 Sobic006G252700 Sobic001G371200--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic001G371200--Sobic006G278700 Sobic002G378200 Sobic002G378200 Sobic001G371200--Sobic002G378200 Sobic007G200600 Sobic007G200600 Sobic001G371200--Sobic007G200600 Sobic003G081000 Sobic003G081000 Sobic001G371200--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic001G371200--Sobic004G283000 Sobic010G033400 Sobic010G033400 Sobic007G118200--Sobic010G033400 Sobic007G118200--Sobic003G081000 Sobic004G350100 Sobic004G350100 Sobic007G118200--Sobic004G350100 Sobic009G198100 Sobic009G198100 Sobic007G118200--Sobic009G198100 Sobic008G174300 Sobic008G174300 Sobic007G118200--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic007G118200--Sobic002G034600 Sobic007G118200--Sobic006G252700 Sobic001G028400 Sobic001G028400 Sobic007G118200--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic007G118200--Sobic001G408700 Sobic001G143500 Sobic001G143500 Sobic002G313500--Sobic001G143500 Sobic002G313500--Sobic001G371200 Sobic002G313500--Sobic004G350100 Sobic002G313500--Sobic002G378200 Sobic002G313500--Sobic004G283000 Sobic008G139700 Sobic008G139700 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic002G313500--Sobic001G466700 Sobic010G017800 Sobic010G017800 Sobic002G313500--Sobic010G017800 Sobic001G466700--Sobic006G252700 Sobic001G466700--Sobic003G081000 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic001G466700--Sobic007G118200 Sobic006G252700--Sobic003G081000 Sobic006G252700--Sobic001G466700 Sobic006G252700--Sobic004G350100 Sobic006G252700--Sobic001G143500 Sobic006G252700--Sobic007G118200 Sobic006G252700--Sobic006G278700 Sobic003G401100 Sobic003G401100 Sobic006G252700--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic006G252700--Sobic003G439800 Sobic006G252700--Sobic002G034600 Sobic006G278700--Sobic002G378200 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic001G360200 Sobic001G360200 Sobic006G278700--Sobic001G360200 Sobic006G278700--Sobic003G401100 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic002G378200--Sobic004G007300 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic007G104800 Sobic007G104800 Sobic007G200600--Sobic007G104800 Sobic001G119300 Sobic001G119300 Sobic007G200600--Sobic001G119300 Sobic001G497300 Sobic001G497300 Sobic007G200600--Sobic001G497300 Sobic007G026300 Sobic007G026300 Sobic007G200600--Sobic007G026300 Sobic003G187400 Sobic003G187400 Sobic007G200600--Sobic003G187400 Sobic007G200600--Sobic004G021100 Sobic001G512700 Sobic001G512700 Sobic007G200600--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic007G200600--Sobic007G132400 Sobic004G084300 Sobic004G084300 Sobic007G200600--Sobic004G084300 Sobic003G081000--Sobic007G118200 Sobic003G081000--Sobic008G174300 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic003G081000--Sobic009G198100 Sobic003G081000--Sobic006G252700 Sobic003G081000--Sobic010G033400 Sobic003G081000--Sobic001G466700 Sobic003G081000--Sobic004G350100 Sobic003G248500 Sobic003G248500 Sobic004G283000--Sobic003G248500 Sobic004G283000--Sobic002G388200 Sobic004G283000--Sobic004G007300 Sobic004G283000--Sobic004G350100 Sobic004G283000--Sobic008G174300 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300
Octagon: transcription factors


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