Hb_168925_010

Information

Type -
Description -
Location Contig168925: 659-1736
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168925_010 0.0 - - -
2 Hb_039229_010 0.1081938147 - - -
3 Hb_002240_040 0.1919012929 - - -
4 Hb_005531_010 0.2181711919 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
5 Hb_033835_020 0.2252908416 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_008505_020 0.2263135852 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_001741_130 0.244821324 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
8 Hb_163268_010 0.2449814871 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
9 Hb_008790_050 0.2522447778 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000038_190 0.2525097971 - - -
11 Hb_000046_150 0.2525097971 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_000047_120 0.2525097971 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000062_120 0.2525097971 - - hypothetical protein JCGZ_17895 [Jatropha curcas]
14 Hb_000094_140 0.2525097971 - - hypothetical protein POPTR_0007s09865g [Populus trichocarpa]
15 Hb_000100_080 0.2525097971 - - -
16 Hb_000120_830 0.2525097971 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
17 Hb_000134_060 0.2525097971 - - PREDICTED: LOW QUALITY PROTEIN: extended synaptotagmin-1-like [Jatropha curcas]
18 Hb_000173_450 0.2525097971 - - -
19 Hb_000175_170 0.2525097971 - - PREDICTED: SNF1-related protein kinase regulatory subunit gamma-like PV42a [Jatropha curcas]
20 Hb_000181_170 0.2525097971 - - hypothetical protein POPTR_0011s11750g [Populus trichocarpa]

Gene co-expression network

sample Hb_168925_010 Hb_168925_010 Hb_039229_010 Hb_039229_010 Hb_168925_010--Hb_039229_010 Hb_002240_040 Hb_002240_040 Hb_168925_010--Hb_002240_040 Hb_005531_010 Hb_005531_010 Hb_168925_010--Hb_005531_010 Hb_033835_020 Hb_033835_020 Hb_168925_010--Hb_033835_020 Hb_008505_020 Hb_008505_020 Hb_168925_010--Hb_008505_020 Hb_001741_130 Hb_001741_130 Hb_168925_010--Hb_001741_130 Hb_039229_010--Hb_002240_040 Hb_039229_010--Hb_005531_010 Hb_039229_010--Hb_033835_020 Hb_039229_010--Hb_008505_020 Hb_039229_010--Hb_001741_130 Hb_002240_040--Hb_005531_010 Hb_002240_040--Hb_033835_020 Hb_002240_040--Hb_008505_020 Hb_002240_040--Hb_001741_130 Hb_163268_010 Hb_163268_010 Hb_002240_040--Hb_163268_010 Hb_005531_010--Hb_033835_020 Hb_005531_010--Hb_008505_020 Hb_005531_010--Hb_001741_130 Hb_005531_010--Hb_163268_010 Hb_000756_020 Hb_000756_020 Hb_005531_010--Hb_000756_020 Hb_033835_020--Hb_008505_020 Hb_033835_020--Hb_001741_130 Hb_033835_020--Hb_163268_010 Hb_033835_020--Hb_000756_020 Hb_008505_020--Hb_001741_130 Hb_008505_020--Hb_163268_010 Hb_008505_020--Hb_000756_020 Hb_001741_130--Hb_163268_010 Hb_001741_130--Hb_000756_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.651845 4.69909 0 0

CAGE analysis