Hb_039229_010

Information

Type -
Description -
Location Contig39229: 2263-8279
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039229_010 0.0 - - -
2 Hb_002240_040 0.0849386188 - - -
3 Hb_168925_010 0.1081938147 - - -
4 Hb_005531_010 0.111738201 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
5 Hb_033835_020 0.119010766 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_008505_020 0.1200557834 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_001741_130 0.1389793093 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
8 Hb_163268_010 0.1391431721 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
9 Hb_000756_020 0.1762653982 - - BnaA05g19440D [Brassica napus]
10 Hb_008790_050 0.2063413424 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003786_090 0.2464730354 - - hypothetical protein JCGZ_19199 [Jatropha curcas]
12 Hb_011249_040 0.2594996216 - - PREDICTED: acetylajmalan esterase-like [Populus euphratica]
13 Hb_167711_040 0.2701911958 - - PREDICTED: cucumisin-like [Jatropha curcas]
14 Hb_156473_010 0.2706066035 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
15 Hb_000068_030 0.2813953396 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
16 Hb_005072_010 0.2883929352 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
17 Hb_012338_020 0.292185565 - - -
18 Hb_000249_120 0.2985300894 - - PREDICTED: uncharacterized protein LOC104613364 [Nelumbo nucifera]
19 Hb_100873_030 0.2996247907 - - PREDICTED: uncharacterized protein LOC105795653 [Gossypium raimondii]
20 Hb_042223_010 0.3087940147 - - Protein Z, putative [Ricinus communis]

Gene co-expression network

sample Hb_039229_010 Hb_039229_010 Hb_002240_040 Hb_002240_040 Hb_039229_010--Hb_002240_040 Hb_168925_010 Hb_168925_010 Hb_039229_010--Hb_168925_010 Hb_005531_010 Hb_005531_010 Hb_039229_010--Hb_005531_010 Hb_033835_020 Hb_033835_020 Hb_039229_010--Hb_033835_020 Hb_008505_020 Hb_008505_020 Hb_039229_010--Hb_008505_020 Hb_001741_130 Hb_001741_130 Hb_039229_010--Hb_001741_130 Hb_002240_040--Hb_005531_010 Hb_002240_040--Hb_033835_020 Hb_002240_040--Hb_008505_020 Hb_002240_040--Hb_001741_130 Hb_163268_010 Hb_163268_010 Hb_002240_040--Hb_163268_010 Hb_168925_010--Hb_002240_040 Hb_168925_010--Hb_005531_010 Hb_168925_010--Hb_033835_020 Hb_168925_010--Hb_008505_020 Hb_168925_010--Hb_001741_130 Hb_005531_010--Hb_033835_020 Hb_005531_010--Hb_008505_020 Hb_005531_010--Hb_001741_130 Hb_005531_010--Hb_163268_010 Hb_000756_020 Hb_000756_020 Hb_005531_010--Hb_000756_020 Hb_033835_020--Hb_008505_020 Hb_033835_020--Hb_001741_130 Hb_033835_020--Hb_163268_010 Hb_033835_020--Hb_000756_020 Hb_008505_020--Hb_001741_130 Hb_008505_020--Hb_163268_010 Hb_008505_020--Hb_000756_020 Hb_001741_130--Hb_163268_010 Hb_001741_130--Hb_000756_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0543245 0.196212 0 0

CAGE analysis