Hb_099157_010

Information

Type -
Description -
Location Contig99157: 817-2996
Sequence    

Annotation

kegg
ID pxb:103950761
description uncharacterized LOC103950761
nr
ID XP_012068260.1
description PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16058 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64790: 532-782
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099157_010 0.0 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
2 Hb_000000_200 0.1100826913 - - PREDICTED: protein TRANSPARENT TESTA 12 [Jatropha curcas]
3 Hb_000609_020 0.1109807622 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
4 Hb_008376_020 0.1182824752 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
5 Hb_000847_120 0.11921323 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
6 Hb_000645_250 0.1316729791 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
7 Hb_000836_260 0.1334352716 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
8 Hb_004310_170 0.1418939916 - - PREDICTED: protein mago nashi homolog [Jatropha curcas]
9 Hb_010334_050 0.1434145322 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003640_010 0.1497615001 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
11 Hb_168319_060 0.1513032531 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
12 Hb_004010_090 0.1545761884 - - ATP binding protein, putative [Ricinus communis]
13 Hb_188281_050 0.1571999284 - - PREDICTED: solute carrier family 35 member F1-like isoform X1 [Vitis vinifera]
14 Hb_001040_200 0.1573482928 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Jatropha curcas]
15 Hb_000751_060 0.1586266564 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
16 Hb_013848_030 0.1618809329 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]
17 Hb_001300_140 0.1625934063 - - -
18 Hb_004943_010 0.163414227 - - cationic amino acid transporter, putative [Ricinus communis]
19 Hb_003398_090 0.1640029013 - - PREDICTED: expansin-A4 [Jatropha curcas]
20 Hb_029510_090 0.1661511214 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]

Gene co-expression network

sample Hb_099157_010 Hb_099157_010 Hb_000000_200 Hb_000000_200 Hb_099157_010--Hb_000000_200 Hb_000609_020 Hb_000609_020 Hb_099157_010--Hb_000609_020 Hb_008376_020 Hb_008376_020 Hb_099157_010--Hb_008376_020 Hb_000847_120 Hb_000847_120 Hb_099157_010--Hb_000847_120 Hb_000645_250 Hb_000645_250 Hb_099157_010--Hb_000645_250 Hb_000836_260 Hb_000836_260 Hb_099157_010--Hb_000836_260 Hb_000000_200--Hb_000609_020 Hb_010334_050 Hb_010334_050 Hb_000000_200--Hb_010334_050 Hb_000000_200--Hb_008376_020 Hb_000000_200--Hb_000847_120 Hb_000000_200--Hb_000645_250 Hb_000609_020--Hb_008376_020 Hb_000609_020--Hb_000847_120 Hb_000609_020--Hb_010334_050 Hb_000609_020--Hb_000645_250 Hb_008376_020--Hb_000847_120 Hb_001004_130 Hb_001004_130 Hb_008376_020--Hb_001004_130 Hb_008376_020--Hb_000645_250 Hb_006573_250 Hb_006573_250 Hb_008376_020--Hb_006573_250 Hb_000847_120--Hb_000836_260 Hb_000847_120--Hb_000645_250 Hb_000751_070 Hb_000751_070 Hb_000847_120--Hb_000751_070 Hb_000751_060 Hb_000751_060 Hb_000645_250--Hb_000751_060 Hb_060152_010 Hb_060152_010 Hb_000645_250--Hb_060152_010 Hb_000645_250--Hb_000751_070 Hb_001300_140 Hb_001300_140 Hb_000836_260--Hb_001300_140 Hb_009150_060 Hb_009150_060 Hb_000836_260--Hb_009150_060 Hb_004943_010 Hb_004943_010 Hb_000836_260--Hb_004943_010 Hb_000836_260--Hb_008376_020 Hb_000753_180 Hb_000753_180 Hb_000836_260--Hb_000753_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.340862 1.42769 1.95928 0 0.0792685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.141638 4.29786 1.8803

CAGE analysis