Hb_007192_110

Information

Type -
Description -
Location Contig7192: 63037-64778
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007192_110 0.0 - - -
2 Hb_003304_040 0.0791259964 - - hypothetical protein CICLE_v10003343mg, partial [Citrus clementina]
3 Hb_027014_010 0.2925390229 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
4 Hb_004162_300 0.2926313255 - - monovalent cation:proton antiporter, putative [Ricinus communis]
5 Hb_163115_010 0.295012842 - - -
6 Hb_034050_010 0.3010909622 - - PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo]
7 Hb_183366_010 0.3028463749 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
8 Hb_121031_010 0.3036407638 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
9 Hb_001809_040 0.3064268187 - - PREDICTED: uncharacterized protein LOC105638660 [Jatropha curcas]
10 Hb_000599_060 0.3116705201 - - PREDICTED: legumin A-like [Jatropha curcas]
11 Hb_004532_010 0.3217112044 - - PREDICTED: uncharacterized protein LOC105800934 [Gossypium raimondii]
12 Hb_000875_100 0.324130963 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
13 Hb_012193_020 0.3588332112 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
14 Hb_002918_190 0.3649859052 - - Uncharacterized protein TCM_029816 [Theobroma cacao]
15 Hb_002498_190 0.3861528302 - - -
16 Hb_046707_010 0.38955365 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
17 Hb_147123_010 0.3923796866 - - Chorismate mutase, chloroplast precursor, putative [Ricinus communis]
18 Hb_037271_010 0.3934454096 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
19 Hb_001014_200 0.3963700126 - - -
20 Hb_048110_010 0.3982945213 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Jatropha curcas]

Gene co-expression network

sample Hb_007192_110 Hb_007192_110 Hb_003304_040 Hb_003304_040 Hb_007192_110--Hb_003304_040 Hb_027014_010 Hb_027014_010 Hb_007192_110--Hb_027014_010 Hb_004162_300 Hb_004162_300 Hb_007192_110--Hb_004162_300 Hb_163115_010 Hb_163115_010 Hb_007192_110--Hb_163115_010 Hb_034050_010 Hb_034050_010 Hb_007192_110--Hb_034050_010 Hb_183366_010 Hb_183366_010 Hb_007192_110--Hb_183366_010 Hb_121031_010 Hb_121031_010 Hb_003304_040--Hb_121031_010 Hb_003304_040--Hb_034050_010 Hb_000875_100 Hb_000875_100 Hb_003304_040--Hb_000875_100 Hb_003304_040--Hb_004162_300 Hb_003304_040--Hb_027014_010 Hb_027014_010--Hb_004162_300 Hb_027014_010--Hb_163115_010 Hb_027014_010--Hb_034050_010 Hb_027014_010--Hb_183366_010 Hb_027014_010--Hb_121031_010 Hb_001809_040 Hb_001809_040 Hb_027014_010--Hb_001809_040 Hb_004162_300--Hb_163115_010 Hb_004162_300--Hb_034050_010 Hb_004162_300--Hb_121031_010 Hb_004162_300--Hb_183366_010 Hb_004162_300--Hb_001809_040 Hb_163115_010--Hb_183366_010 Hb_163115_010--Hb_001809_040 Hb_000599_060 Hb_000599_060 Hb_163115_010--Hb_000599_060 Hb_004532_010 Hb_004532_010 Hb_163115_010--Hb_004532_010 Hb_034050_010--Hb_121031_010 Hb_034050_010--Hb_000875_100 Hb_034050_010--Hb_163115_010 Hb_034050_010--Hb_183366_010 Hb_183366_010--Hb_001809_040 Hb_183366_010--Hb_000599_060 Hb_183366_010--Hb_004532_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0157338 0 0.0356568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0463469 0 0 0 0

CAGE analysis