Hb_004631_120

Information

Type -
Description -
Location Contig4631: 87677-88033
Sequence    

Annotation

kegg
ID rcu:RCOM_0338110
description hypothetical protein
nr
ID XP_002534100.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T781
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0338110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004631_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_011692_030 0.3400902564 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
3 Hb_020763_020 0.3401375122 - - hypothetical protein POPTR_0001s27010g [Populus trichocarpa]
4 Hb_062827_010 0.3410373979 - - -
5 Hb_003041_040 0.3434621477 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
6 Hb_004102_120 0.3599250737 - - -
7 Hb_003861_130 0.3757952763 - - -
8 Hb_068804_160 0.3758213115 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
9 Hb_136696_010 0.376101278 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
10 Hb_002779_020 0.3761325846 - - transcription factor, putative [Ricinus communis]
11 Hb_115350_010 0.3761500944 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
12 Hb_061390_010 0.3762134372 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
13 Hb_008880_010 0.3762190043 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
14 Hb_001623_030 0.3919167881 - - serine/threonine protein kinase, putative [Ricinus communis]
15 Hb_004304_050 0.3994513751 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
16 Hb_005183_160 0.4008621103 - - -
17 Hb_003918_040 0.4029284728 - - -
18 Hb_001798_050 0.4066831543 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
19 Hb_135978_010 0.4085361841 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
20 Hb_032202_030 0.4158200364 - - -

Gene co-expression network

sample Hb_004631_120 Hb_004631_120 Hb_011692_030 Hb_011692_030 Hb_004631_120--Hb_011692_030 Hb_020763_020 Hb_020763_020 Hb_004631_120--Hb_020763_020 Hb_062827_010 Hb_062827_010 Hb_004631_120--Hb_062827_010 Hb_003041_040 Hb_003041_040 Hb_004631_120--Hb_003041_040 Hb_004102_120 Hb_004102_120 Hb_004631_120--Hb_004102_120 Hb_003861_130 Hb_003861_130 Hb_004631_120--Hb_003861_130 Hb_011692_030--Hb_020763_020 Hb_011692_030--Hb_003041_040 Hb_011692_030--Hb_062827_010 Hb_011692_030--Hb_004102_120 Hb_011692_030--Hb_003861_130 Hb_001623_030 Hb_001623_030 Hb_011692_030--Hb_001623_030 Hb_020763_020--Hb_003041_040 Hb_020763_020--Hb_062827_010 Hb_020763_020--Hb_004102_120 Hb_020763_020--Hb_003861_130 Hb_020763_020--Hb_001623_030 Hb_062827_010--Hb_003041_040 Hb_062827_010--Hb_004102_120 Hb_062827_010--Hb_003861_130 Hb_062827_010--Hb_001623_030 Hb_003041_040--Hb_004102_120 Hb_003041_040--Hb_003861_130 Hb_003041_040--Hb_001623_030 Hb_004102_120--Hb_003861_130 Hb_004102_120--Hb_001623_030 Hb_135978_010 Hb_135978_010 Hb_004102_120--Hb_135978_010 Hb_003861_130--Hb_001623_030 Hb_003861_130--Hb_135978_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.175231 0 0 0.145815 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.365066 0 0 0 0

CAGE analysis