Hb_001205_050

Information

Type -
Description -
Location Contig1205: 37257-37502
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_050 0.0 - - -
2 Hb_147069_010 0.0318443765 - - Phosphate import ATP-binding PstB 2 [Gossypium arboreum]
3 Hb_100404_010 0.0372986137 - - Cysteine-rich receptor-like protein kinase 29 [Glycine soja]
4 Hb_000832_360 0.0687211124 - - -
5 Hb_000103_380 0.1022504808 - - PREDICTED: uncharacterized protein LOC104596624 [Nelumbo nucifera]
6 Hb_001105_140 0.1210639234 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
7 Hb_073467_010 0.1233490927 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
8 Hb_005736_080 0.1256580203 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
9 Hb_003058_160 0.1275506268 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004924_040 0.1278446263 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
11 Hb_141990_030 0.1281727774 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
12 Hb_002977_020 0.1410750586 - - PREDICTED: glycine-rich cell wall structural protein 1.8-like [Nelumbo nucifera]
13 Hb_145331_010 0.1416492233 transcription factor TF Family: NAC hypothetical protein POPTR_0016s07690g [Populus trichocarpa]
14 Hb_005183_060 0.1422079324 - - hypothetical protein JCGZ_04271 [Jatropha curcas]
15 Hb_001021_020 0.1502409562 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
16 Hb_002876_010 0.1570125571 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
17 Hb_000189_460 0.1633458108 - - -
18 Hb_062503_010 0.1646781845 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000334_010 0.1691240492 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
20 Hb_004176_090 0.1698652955 - - Nuc-1 negative regulatory protein preg, putative [Ricinus communis]

Gene co-expression network

sample Hb_001205_050 Hb_001205_050 Hb_147069_010 Hb_147069_010 Hb_001205_050--Hb_147069_010 Hb_100404_010 Hb_100404_010 Hb_001205_050--Hb_100404_010 Hb_000832_360 Hb_000832_360 Hb_001205_050--Hb_000832_360 Hb_000103_380 Hb_000103_380 Hb_001205_050--Hb_000103_380 Hb_001105_140 Hb_001105_140 Hb_001205_050--Hb_001105_140 Hb_073467_010 Hb_073467_010 Hb_001205_050--Hb_073467_010 Hb_147069_010--Hb_000832_360 Hb_147069_010--Hb_100404_010 Hb_147069_010--Hb_000103_380 Hb_147069_010--Hb_001105_140 Hb_005736_080 Hb_005736_080 Hb_147069_010--Hb_005736_080 Hb_100404_010--Hb_000832_360 Hb_100404_010--Hb_073467_010 Hb_100404_010--Hb_000103_380 Hb_003058_160 Hb_003058_160 Hb_100404_010--Hb_003058_160 Hb_000832_360--Hb_000103_380 Hb_000832_360--Hb_001105_140 Hb_000832_360--Hb_005736_080 Hb_141990_030 Hb_141990_030 Hb_000832_360--Hb_141990_030 Hb_000103_380--Hb_001105_140 Hb_000103_380--Hb_005736_080 Hb_000103_380--Hb_141990_030 Hb_002876_010 Hb_002876_010 Hb_000103_380--Hb_002876_010 Hb_000103_380--Hb_003058_160 Hb_001105_140--Hb_005736_080 Hb_001105_140--Hb_141990_030 Hb_001105_140--Hb_003058_160 Hb_004924_040 Hb_004924_040 Hb_001105_140--Hb_004924_040 Hb_001105_140--Hb_073467_010 Hb_073467_010--Hb_003058_160 Hb_073467_010--Hb_004924_040 Hb_073467_010--Hb_141990_030 Hb_073467_010--Hb_005736_080 Hb_073467_010--Hb_000103_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.632582 0.926045 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.1125

CAGE analysis