Hb_000367_150

Information

Type -
Description -
Location Contig367: 132688-145066
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_150 0.0 - - -
2 Hb_007456_030 0.0402938323 - - -
3 Hb_001691_130 0.0719349476 - - PREDICTED: uncharacterized protein LOC104587431 [Nelumbo nucifera]
4 Hb_001231_020 0.0757509487 - - -
5 Hb_106274_010 0.0771412096 - - hypothetical protein VITISV_008825 [Vitis vinifera]
6 Hb_002630_030 0.0806557555 - - OSIGBa0132I10.1 [Oryza sativa Indica Group]
7 Hb_005551_030 0.0862346994 - - PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Jatropha curcas]
8 Hb_105785_010 0.0875103473 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
9 Hb_019135_010 0.0905511967 - - -
10 Hb_052469_020 0.0959149312 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Vitis vinifera]
11 Hb_004968_090 0.0962407282 - - PREDICTED: uncharacterized protein LOC104882781 [Vitis vinifera]
12 Hb_007595_040 0.0973784427 - - ribosomal protein L2 (chloroplast) [Berberis bealei]
13 Hb_005666_030 0.0984562842 - - PREDICTED: uncharacterized protein LOC103489421 [Cucumis melo]
14 Hb_007632_140 0.1061318096 - - -
15 Hb_005337_010 0.106490399 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
16 Hb_043960_010 0.1196569987 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_000362_100 0.1227539054 - - -
18 Hb_005029_030 0.1270117742 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
19 Hb_011987_010 0.1412606041 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
20 Hb_002762_010 0.1418798899 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]

Gene co-expression network

sample Hb_000367_150 Hb_000367_150 Hb_007456_030 Hb_007456_030 Hb_000367_150--Hb_007456_030 Hb_001691_130 Hb_001691_130 Hb_000367_150--Hb_001691_130 Hb_001231_020 Hb_001231_020 Hb_000367_150--Hb_001231_020 Hb_106274_010 Hb_106274_010 Hb_000367_150--Hb_106274_010 Hb_002630_030 Hb_002630_030 Hb_000367_150--Hb_002630_030 Hb_005551_030 Hb_005551_030 Hb_000367_150--Hb_005551_030 Hb_052469_020 Hb_052469_020 Hb_007456_030--Hb_052469_020 Hb_105785_010 Hb_105785_010 Hb_007456_030--Hb_105785_010 Hb_007595_040 Hb_007595_040 Hb_007456_030--Hb_007595_040 Hb_005337_010 Hb_005337_010 Hb_007456_030--Hb_005337_010 Hb_007456_030--Hb_001691_130 Hb_001691_130--Hb_002630_030 Hb_004968_090 Hb_004968_090 Hb_001691_130--Hb_004968_090 Hb_001691_130--Hb_005551_030 Hb_005666_030 Hb_005666_030 Hb_001691_130--Hb_005666_030 Hb_001691_130--Hb_001231_020 Hb_001691_130--Hb_106274_010 Hb_001231_020--Hb_005551_030 Hb_001231_020--Hb_106274_010 Hb_001231_020--Hb_005666_030 Hb_001231_020--Hb_004968_090 Hb_001231_020--Hb_002630_030 Hb_106274_010--Hb_005551_030 Hb_106274_010--Hb_005666_030 Hb_106274_010--Hb_004968_090 Hb_011987_010 Hb_011987_010 Hb_106274_010--Hb_011987_010 Hb_002630_030--Hb_004968_090 Hb_002630_030--Hb_005666_030 Hb_002630_030--Hb_005551_030 Hb_005551_030--Hb_005666_030 Hb_005551_030--Hb_004968_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0265676 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0121217 0.125648

CAGE analysis