Hb_000295_140

Information

Type -
Description -
Location Contig295: 168010-170882
Sequence    

Annotation

kegg
ID rcu:RCOM_0519540
description hypothetical protein
nr
ID XP_012065610.1
description PREDICTED: uncharacterized protein LOC105628741 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L567
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16859 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000295_140 0.0 - - PREDICTED: uncharacterized protein LOC105628741 [Jatropha curcas]
2 Hb_032907_020 0.0008291554 - - calmodulin binding protein, putative [Ricinus communis]
3 Hb_086720_010 0.0025405219 - - CTV.19 [Citrus trifoliata]
4 Hb_007407_020 0.003599568 - - ATP binding protein, putative [Ricinus communis]
5 Hb_053224_010 0.0060574796 - - PREDICTED: protein argonaute 16 isoform X2 [Jatropha curcas]
6 Hb_168451_010 0.0063813008 - - PREDICTED: acid phosphatase 1-like [Populus euphratica]
7 Hb_138485_010 0.0114074146 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Populus euphratica]
8 Hb_003784_030 0.0143583584 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001021_190 0.0171891878 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_011515_020 0.0198600714 - - PREDICTED: dehydration-responsive element-binding protein 1F-like [Jatropha curcas]
11 Hb_008887_060 0.0208456362 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
12 Hb_077165_010 0.0266333772 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004117_220 0.0267899259 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
14 Hb_000378_020 0.0270324215 - - PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
15 Hb_000005_150 0.027499191 - - PREDICTED: cation/H(+) antiporter 10-like [Jatropha curcas]
16 Hb_000123_080 0.0281023666 transcription factor TF Family: B3 hypothetical protein VITISV_040593 [Vitis vinifera]
17 Hb_002383_010 0.0285207731 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
18 Hb_013405_170 0.028751733 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
19 Hb_005743_040 0.0296136685 - - JHL22C18.10 [Jatropha curcas]
20 Hb_012758_020 0.0328436378 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000295_140 Hb_000295_140 Hb_032907_020 Hb_032907_020 Hb_000295_140--Hb_032907_020 Hb_086720_010 Hb_086720_010 Hb_000295_140--Hb_086720_010 Hb_007407_020 Hb_007407_020 Hb_000295_140--Hb_007407_020 Hb_053224_010 Hb_053224_010 Hb_000295_140--Hb_053224_010 Hb_168451_010 Hb_168451_010 Hb_000295_140--Hb_168451_010 Hb_138485_010 Hb_138485_010 Hb_000295_140--Hb_138485_010 Hb_032907_020--Hb_086720_010 Hb_032907_020--Hb_007407_020 Hb_032907_020--Hb_053224_010 Hb_032907_020--Hb_168451_010 Hb_032907_020--Hb_138485_010 Hb_086720_010--Hb_007407_020 Hb_086720_010--Hb_053224_010 Hb_086720_010--Hb_138485_010 Hb_086720_010--Hb_168451_010 Hb_007407_020--Hb_138485_010 Hb_007407_020--Hb_053224_010 Hb_007407_020--Hb_168451_010 Hb_053224_010--Hb_168451_010 Hb_003784_030 Hb_003784_030 Hb_053224_010--Hb_003784_030 Hb_168451_010--Hb_003784_030 Hb_008887_060 Hb_008887_060 Hb_138485_010--Hb_008887_060 Hb_004117_220 Hb_004117_220 Hb_138485_010--Hb_004117_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0350194 0.0517648 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis